Guide to the Human Genome
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Name: PRKCG Sequence: fasta or formatted (697aa) NCBI GI: 13384594
Description:

protein kinase C, gamma

Referenced in:

Cerebellum
Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         36           2
 C cysteine            3.2         22           2
 D aspartate           6.2         43           3
 E glutamate           5.7         40           3
 F phenylalanine       6.3         44           2
 G glycine             8.5         59           2
 H histidine           3.2         22           1
 I isoleucine          3.9         27           2
 K lysine              5.3         37           2
 L leucine             8.3         58           2
 M methionine          2.3         16           1
 N asparagine          2.6         18           1
 P proline             8.0         56           3
 Q glutamine           3.3         23           2
 R arginine            6.6         46           2
 S serine              5.5         38           3
 T threonine           5.0         35           3
 V valine              6.9         48           2
 W tryptophan          1.3          9           2
 Y tyrosine            2.9         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, gamma 
PRKCA                 0.704   protein kinase C, alpha 
PRKCB                 0.679   protein kinase C, beta isoform 2 
PRKCB                 0.661   protein kinase C, beta isoform 1 
PRKCE                 0.266   protein kinase C, epsilon 
PRKCH                 0.249   protein kinase C, eta 
PRKCQ                 0.234   protein kinase C, theta 
PRKCD                 0.233   protein kinase C, delta 
PRKCD                 0.233   protein kinase C, delta 
PRKCI                 0.225   protein kinase C, iota 
PRKCZ                 0.221   protein kinase C, zeta isoform 2 
PRKCZ                 0.221   protein kinase C, zeta isoform 2 
PRKCZ                 0.221   protein kinase C, zeta isoform 1 
PKN1                  0.204   protein kinase N1 isoform 1 
PKN1                  0.204   protein kinase N1 isoform 2 
PKN2                  0.195   protein kinase N2 
AKT3                  0.194   AKT3 kinase isoform 1 
AKT3                  0.194   AKT3 kinase isoform 2 
AKT2                  0.192   AKT2 kinase 
AKT1                  0.188   AKT1 kinase 
AKT1                  0.188   AKT1 kinase 
AKT1                  0.188   AKT1 kinase 
PKN3                  0.184   protein kinase PKNbeta 
SGK1                  0.182   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.182   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.182   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.182   serum/glucocorticoid regulated kinase 1 isoform 2 [...
SGK2                  0.179   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK2                  0.178   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK3                  0.169   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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