Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PRKCB Sequence: fasta or formatted (673aa) NCBI GI: 20127450
Description:

protein kinase C, beta isoform 2

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [671aa] protein kinase C, beta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         31           2
 C cysteine            3.1         21           2
 D aspartate           6.5         44           3
 E glutamate           7.6         51           2
 F phenylalanine       6.7         45           2
 G glycine             6.8         46           2
 H histidine           3.0         20           1
 I isoleucine          4.8         32           2
 K lysine              8.6         58           2
 L leucine             6.8         46           2
 M methionine          3.0         20           2
 N asparagine          3.6         24           2
 P proline             5.8         39           3
 Q glutamine           3.7         25           2
 R arginine            4.9         33           2
 S serine              5.6         38           2
 T threonine           4.5         30           2
 V valine              6.4         43           2
 W tryptophan          1.3          9           2
 Y tyrosine            2.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, beta isoform 2 
PRKCB                 0.953   protein kinase C, beta isoform 1 
PRKCA                 0.811   protein kinase C, alpha 
PRKCG                 0.709   protein kinase C, gamma 
PRKCE                 0.405   protein kinase C, epsilon 
PRKCH                 0.272   protein kinase C, eta 
PRKCQ                 0.258   protein kinase C, theta 
PRKCD                 0.253   protein kinase C, delta 
PRKCD                 0.253   protein kinase C, delta 
PRKCI                 0.249   protein kinase C, iota 
PRKCZ                 0.243   protein kinase C, zeta isoform 2 
PRKCZ                 0.243   protein kinase C, zeta isoform 2 
PRKCZ                 0.243   protein kinase C, zeta isoform 1 
PKN2                  0.216   protein kinase N2 
AKT3                  0.213   AKT3 kinase isoform 1 
AKT3                  0.213   AKT3 kinase isoform 2 
PKN1                  0.212   protein kinase N1 isoform 1 
PKN1                  0.212   protein kinase N1 isoform 2 
AKT2                  0.210   AKT2 kinase 
AKT1                  0.210   AKT1 kinase 
AKT1                  0.210   AKT1 kinase 
AKT1                  0.210   AKT1 kinase 
PKN3                  0.201   protein kinase PKNbeta 
SGK1                  0.189   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.189   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.189   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.189   serum/glucocorticoid regulated kinase 1 isoform 2 [...
SGK2                  0.181   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK2                  0.179   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK3                  0.178   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press