Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PRKCA Sequence: fasta or formatted (672aa) NCBI GI: 4506067
Description:

protein kinase C, alpha

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         30           2
 C cysteine            3.0         20           2
 D aspartate           7.6         51           3
 E glutamate           6.2         42           2
 F phenylalanine       6.2         42           2
 G glycine             7.0         47           2
 H histidine           3.1         21           1
 I isoleucine          4.8         32           2
 K lysine              8.8         59           2
 L leucine             7.4         50           2
 M methionine          3.1         21           2
 N asparagine          3.7         25           2
 P proline             5.8         39           2
 Q glutamine           4.2         28           2
 R arginine            4.5         30           2
 S serine              5.1         34           1
 T threonine           4.2         28           2
 V valine              6.7         45           2
 W tryptophan          1.2          8           2
 Y tyrosine            3.0         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, alpha 
PRKCB                 0.813   protein kinase C, beta isoform 2 
PRKCB                 0.791   protein kinase C, beta isoform 1 
PRKCG                 0.735   protein kinase C, gamma 
PRKCE                 0.409   protein kinase C, epsilon 
PRKCH                 0.274   protein kinase C, eta 
PRKCQ                 0.262   protein kinase C, theta 
PRKCD                 0.253   protein kinase C, delta 
PRKCD                 0.253   protein kinase C, delta 
PRKCI                 0.252   protein kinase C, iota 
PRKCZ                 0.245   protein kinase C, zeta isoform 2 
PRKCZ                 0.245   protein kinase C, zeta isoform 2 
PRKCZ                 0.245   protein kinase C, zeta isoform 1 
PKN2                  0.221   protein kinase N2 
PKN1                  0.215   protein kinase N1 isoform 1 
PKN1                  0.215   protein kinase N1 isoform 2 
AKT2                  0.213   AKT2 kinase 
AKT3                  0.211   AKT3 kinase isoform 1 
AKT3                  0.211   AKT3 kinase isoform 2 
AKT1                  0.207   AKT1 kinase 
AKT1                  0.207   AKT1 kinase 
AKT1                  0.207   AKT1 kinase 
SGK1                  0.198   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.198   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.198   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.198   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PKN3                  0.198   protein kinase PKNbeta 
SGK3                  0.192   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.192   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK2                  0.184   serum/glucocorticoid regulated kinase 2 isoform beta...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press