Guide to the Human Genome
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Name: PRKCB Sequence: fasta or formatted (671aa) NCBI GI: 47157322
Description:

protein kinase C, beta isoform 1

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [673aa] protein kinase C, beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         31           2
 C cysteine            3.0         20           2
 D aspartate           6.9         46           3
 E glutamate           7.3         49           2
 F phenylalanine       6.6         44           2
 G glycine             6.7         45           2
 H histidine           2.8         19           1
 I isoleucine          4.8         32           2
 K lysine              8.8         59           2
 L leucine             7.0         47           2
 M methionine          3.1         21           2
 N asparagine          3.7         25           2
 P proline             5.5         37           3
 Q glutamine           3.7         25           2
 R arginine            4.8         32           2
 S serine              5.4         36           2
 T threonine           4.9         33           2
 V valine              6.3         42           2
 W tryptophan          1.3          9           2
 Y tyrosine            2.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, beta isoform 1 
PRKCB                 0.958   protein kinase C, beta isoform 2 
PRKCA                 0.794   protein kinase C, alpha 
PRKCG                 0.693   protein kinase C, gamma 
PRKCE                 0.410   protein kinase C, epsilon 
PRKCH                 0.280   protein kinase C, eta 
PRKCQ                 0.269   protein kinase C, theta 
PRKCD                 0.267   protein kinase C, delta 
PRKCD                 0.267   protein kinase C, delta 
PRKCI                 0.248   protein kinase C, iota 
PRKCZ                 0.248   protein kinase C, zeta isoform 2 
PRKCZ                 0.248   protein kinase C, zeta isoform 2 
PRKCZ                 0.248   protein kinase C, zeta isoform 1 
AKT3                  0.224   AKT3 kinase isoform 1 
AKT2                  0.224   AKT2 kinase 
AKT3                  0.224   AKT3 kinase isoform 2 
AKT1                  0.219   AKT1 kinase 
AKT1                  0.219   AKT1 kinase 
AKT1                  0.219   AKT1 kinase 
PKN2                  0.219   protein kinase N2 
PKN1                  0.211   protein kinase N1 isoform 1 
PKN1                  0.211   protein kinase N1 isoform 2 
SGK1                  0.199   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.199   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.199   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.199   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PKN3                  0.192   protein kinase PKNbeta 
SGK2                  0.187   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK3                  0.186   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.186   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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