Guide to the Human Genome
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Name: FTSJ3 Sequence: fasta or formatted (847aa) NCBI GI: 194097365
Description:

FtsJ homolog 3

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         66           2
 C cysteine            0.8          7           2
 D aspartate           7.0         59           3
 E glutamate          10.5         89           9
 F phenylalanine       3.3         28           2
 G glycine             5.7         48           2
 H histidine           1.7         14           1
 I isoleucine          3.2         27           1
 K lysine             10.2         86           4
 L leucine             9.3         79           2
 M methionine          1.4         12           1
 N asparagine          1.8         15           1
 P proline             3.9         33           2
 Q glutamine           5.9         50           4
 R arginine            8.0         68           2
 S serine              6.0         51           2
 T threonine           4.4         37           2
 V valine              6.6         56           2
 W tryptophan          1.1          9           1
 Y tyrosine            1.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FtsJ homolog 3 
FTSJ1                 0.083   FtsJ homolog 1 isoform b 
FTSJ1                 0.083   FtsJ homolog 1 isoform b 
FTSJ1                 0.081   FtsJ homolog 1 isoform a 
FTSJ2                 0.047   FtsJ homolog 2 
CYLC1                 0.023   cylicin, basic protein of sperm head cytoskeleton 1...
PLEC1                 0.018   plectin 1 isoform 11 
PLEC1                 0.018   plectin 1 isoform 10 
PLEC1                 0.018   plectin 1 isoform 8 
PLEC1                 0.018   plectin 1 isoform 7 
PLEC1                 0.018   plectin 1 isoform 6 
PLEC1                 0.018   plectin 1 isoform 3 
PLEC1                 0.018   plectin 1 isoform 2 
PLEC1                 0.018   plectin 1 isoform 1 
TCHH                  0.018   trichohyalin 
CHAF1A                0.015   chromatin assembly factor 1, subunit A (p150) 
LOC283685             0.015   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ARGLU1                0.015   arginine and glutamate rich 1 
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 2 ...
MYH8                  0.014   myosin, heavy chain 8, skeletal muscle, perinatal [...
HTATSF1               0.014   HIV-1 Tat specific factor 1 
HTATSF1               0.014   HIV-1 Tat specific factor 1 
RPGR                  0.013   retinitis pigmentosa GTPase regulator isoform C [Hom...
GOLGA4                0.013   golgi autoantigen, golgin subfamily a, 4 
MYST4                 0.013   MYST histone acetyltransferase (monocytic leukemia)...
CDC2L2                0.013   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.013   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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