Guide to the Human Genome
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Name: RAI14 Sequence: fasta or formatted (951aa) NCBI GI: 224809474
Description:

retinoic acid induced 14 isoform b

Referenced in:

Ankyrin Family
Additional Genes in Development

Other entries for this name:
alt prot [980aa] retinoic acid induced 14 isoform a
alt prot [980aa] retinoic acid induced 14 isoform a
alt prot [980aa] retinoic acid induced 14 isoform a
alt prot [972aa] retinoic acid induced 14 isoform c
alt prot [983aa] retinoic acid induced 14 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         71           3
 C cysteine            1.2         11           1
 D aspartate           4.9         47           2
 E glutamate          11.6        110           3
 F phenylalanine       1.2         11           2
 G glycine             2.7         26           1
 H histidine           2.7         26           2
 I isoleucine          3.4         32           1
 K lysine             10.9        104           2
 L leucine            12.0        114           3
 M methionine          2.4         23           1
 N asparagine          4.0         38           2
 P proline             2.0         19           2
 Q glutamine           7.5         71           3
 R arginine            3.0         29           2
 S serine             11.1        106           3
 T threonine           4.1         39           2
 V valine              5.8         55           2
 W tryptophan          0.1          1           1
 Y tyrosine            1.9         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   retinoic acid induced 14 isoform b 
RAI14                 0.992   retinoic acid induced 14 isoform a 
RAI14                 0.992   retinoic acid induced 14 isoform a 
RAI14                 0.992   retinoic acid induced 14 isoform a 
RAI14                 0.980   retinoic acid induced 14 isoform d 
RAI14                 0.979   retinoic acid induced 14 isoform c 
UACA                  0.184   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.182   uveal autoantigen with coiled-coil domains and ankyr...
ANKRD35               0.138   ankyrin repeat domain 35 
ANKRD24               0.134   ankyrin repeat domain 24 
ANKRD62               0.056   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.056   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.055   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
CLIP1                 0.052   restin isoform b 
CLIP1                 0.052   restin isoform a 
MYH9                  0.051   myosin, heavy polypeptide 9, non-muscle 
ANK3                  0.051   ankyrin 3 isoform 1 
ANKRD44               0.051   ankyrin repeat domain 44 
ANKRD50               0.051   ankyrin repeat domain 50 
DAPK1                 0.050   death-associated protein kinase 1 
ANKRD28               0.049   ankyrin repeat domain 28 
ANKDD1A               0.049   ankyrin repeat and death domain containing 1A 
CCDC18                0.049   sarcoma antigen NY-SAR-41 
HACE1                 0.049   HECT domain and ankyrin repeat containing, E3 ubiqu...
ANKK1                 0.048   ankyrin repeat and kinase domain containing 1 
ANKRD18B              0.048   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.048   PREDICTED: ankyrin repeat domain 18B 
EEA1                  0.048   early endosome antigen 1, 162kD 
CEP250                0.047   centrosomal protein 2 
GOLGB1                0.047   golgi autoantigen, golgin subfamily b, macrogolgin ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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