Guide to the Human Genome
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Name: FBLN7 Sequence: fasta or formatted (439aa) NCBI GI: 189491645
Description:

fibulin 7 isoform 1

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [393aa] fibulin 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         28           2
 C cysteine            6.8         30           1
 D aspartate           3.6         16           1
 E glutamate           4.8         21           1
 F phenylalanine       3.6         16           1
 G glycine             9.3         41           2
 H histidine           2.7         12           1
 I isoleucine          2.5         11           1
 K lysine              2.3         10           1
 L leucine             8.0         35           4
 M methionine          1.6          7           1
 N asparagine          4.1         18           1
 P proline             8.0         35           2
 Q glutamine           6.4         28           2
 R arginine            6.8         30           1
 S serine              8.9         39           2
 T threonine           5.0         22           2
 V valine              6.8         30           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibulin 7 isoform 1 
FBLN7                 0.717   fibulin 7 isoform 2 
FBLN1                 0.155   fibulin 1 isoform C precursor 
FBLN2                 0.138   fibulin 2 isoform b precursor 
FBLN2                 0.138   fibulin 2 isoform a precursor 
FBLN5                 0.128   fibulin 5 precursor 
EFEMP2                0.121   EGF-containing fibulin-like extracellular matrix pr...
EFEMP1                0.121   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.121   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.121   EGF-containing fibulin-like extracellular matrix prot...
FBLN1                 0.113   fibulin 1 isoform D 
HMCN2                 0.101   PREDICTED: hemicentin 2 
HMCN2                 0.101   PREDICTED: hemicentin 2 
HMCN2                 0.101   PREDICTED: hemicentin 2 
FBLN1                 0.095   fibulin 1 isoform B precursor 
HMCN1                 0.092   hemicentin 1 
LTBP2                 0.091   latent transforming growth factor beta binding protei...
FBLN1                 0.089   fibulin 1 isoform A precursor 
FBN3                  0.088   fibrillin 3 precursor 
CD93                  0.087   CD93 antigen precursor 
FBN2                  0.087   fibrillin 2 precursor 
FBN1                  0.085   fibrillin 1 precursor 
LTBP4                 0.085   latent transforming growth factor beta binding prot...
LTBP4                 0.085   latent transforming growth factor beta binding prot...
LTBP4                 0.085   latent transforming growth factor beta binding prot...
PROS1                 0.083   protein S, alpha preproprotein 
LTBP1                 0.082   latent transforming growth factor beta binding prote...
LTBP1                 0.082   latent transforming growth factor beta binding prote...
JAG1                  0.080   jagged 1 precursor 
LTBP3                 0.080   latent transforming growth factor beta binding prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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