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Search of human proteins with 189491634
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|189491634 upstream binding protein 1 (LBP-1a) isoform a
[Homo sapiens]
(540 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo... 1091 0.0
gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo... 1091 0.0
gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo... 1003 0.0
gi|21361278 transcription factor CP2 [Homo sapiens] 734 0.0
gi|7657299 LBP-9 [Homo sapiens] 629 e-180
gi|239735569 grainyhead-like 1 [Homo sapiens] 101 2e-21
gi|170784817 transcription factor CP2-like 3 [Homo sapiens] 97 4e-20
gi|38049009 sister-of-mammalian grainyhead protein isoform 2 [Ho... 96 6e-20
gi|42789723 sister-of-mammalian grainyhead protein isoform 3 [Ho... 96 6e-20
gi|38049007 sister-of-mammalian grainyhead protein isoform 1 [Ho... 96 6e-20
gi|55741677 SET domain containing 1A [Homo sapiens] 38 0.027
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens] 37 0.035
gi|209862789 microtubule associated monoxygenase, calponin and L... 35 0.13
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 35 0.17
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 35 0.17
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 35 0.23
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ... 34 0.30
gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] 34 0.30
gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens] 33 0.51
gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens] 33 0.51
gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo ... 33 0.51
gi|93352554 GPR158-like 1 [Homo sapiens] 33 0.51
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 33 0.66
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 33 0.66
gi|29789379 sphingomyelin synthase 1 [Homo sapiens] 33 0.66
gi|62244004 modulator of estrogen induced transcription isoform ... 33 0.66
gi|63176611 modulator of estrogen induced transcription isoform ... 33 0.66
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 33 0.66
gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 33 0.66
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 33 0.86
>gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo
sapiens]
Length = 540
Score = 1091 bits (2822), Expect = 0.0
Identities = 540/540 (100%), Positives = 540/540 (100%)
Query: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
Sbjct: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
Query: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
Sbjct: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
Query: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
Sbjct: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
Query: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
Sbjct: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
Query: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY 300
DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY
Sbjct: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY 300
Query: 301 GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS
Sbjct: 301 GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
Query: 361 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 420
GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
Sbjct: 361 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 420
Query: 421 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 480
LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR
Sbjct: 421 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 480
Query: 481 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 540
KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK
Sbjct: 481 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 540
>gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo
sapiens]
Length = 540
Score = 1091 bits (2822), Expect = 0.0
Identities = 540/540 (100%), Positives = 540/540 (100%)
Query: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
Sbjct: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
Query: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
Sbjct: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
Query: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
Sbjct: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
Query: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
Sbjct: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
Query: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY 300
DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY
Sbjct: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY 300
Query: 301 GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS
Sbjct: 301 GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
Query: 361 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 420
GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
Sbjct: 361 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 420
Query: 421 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 480
LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR
Sbjct: 421 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 480
Query: 481 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 540
KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK
Sbjct: 481 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 540
>gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo
sapiens]
Length = 504
Score = 1003 bits (2594), Expect = 0.0
Identities = 504/540 (93%), Positives = 504/540 (93%), Gaps = 36/540 (6%)
Query: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
Sbjct: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
Query: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
Sbjct: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
Query: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
Sbjct: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
Query: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
Sbjct: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
Query: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY 300
DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTE
Sbjct: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTE--------------------------- 273
Query: 301 GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
CSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS
Sbjct: 274 ---------CSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 324
Query: 361 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 420
GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
Sbjct: 325 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 384
Query: 421 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 480
LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR
Sbjct: 385 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 444
Query: 481 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 540
KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK
Sbjct: 445 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 504
>gi|21361278 transcription factor CP2 [Homo sapiens]
Length = 502
Score = 734 bits (1895), Expect = 0.0
Identities = 373/545 (68%), Positives = 430/545 (78%), Gaps = 48/545 (8%)
Query: 1 MAWVLKM---DEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDG 57
MAW LK+ DEVIESGLV DFDASLSGIGQELGAGAYSMSDVLALPIFKQE+SSLP D
Sbjct: 1 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN 60
Query: 58 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSII 117
E + PFQYV+CAATSPAVKLHDETLTYLNQGQSYEIRMLDNRK+G++PEINGKLVKSI
Sbjct: 61 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF 120
Query: 118 RVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPA 177
RVVFHDRRLQYTEHQQLEGW+WNRPGDR+LD+DIPMSVGIID R NP+QLN VEFLWDPA
Sbjct: 121 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA 180
Query: 178 KRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKP 237
KRTS FIQVHCISTEFT RKHGGEKGVPFR+Q+DTFK+NENGEYT+HLHSASCQIKVFKP
Sbjct: 181 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP 240
Query: 238 KGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLP 297
KGADRKQKTDREKMEKRT HEKEKYQPSY+TTILTE
Sbjct: 241 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTE------------------------ 276
Query: 298 ADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGAS 357
CSPWP+ YVNNSPSP F S S+ S+ + N S PNHQ +
Sbjct: 277 ------------CSPWPEI--TYVNNSPSPG--FNS-SHSSFSLGEGNGS-PNHQPEPPP 318
Query: 358 QTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRL 417
+ + + P+ T QE QQWL +NRFS++TRLF+NFSGADLLKLT++D++QICG ADGIRL
Sbjct: 319 PVT-DNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRL 377
Query: 418 YNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENG--SGAPYVYHAIYLEEMIA 475
+N+LK R VRPRLTIYVC+E Q QQQ E+G +G +VYHAIYLEE+ A
Sbjct: 378 FNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTA 437
Query: 476 SEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGI 535
E+ K+A +F+I QI+Q+Y+QGPTGIH+L+SD+M+QNFQ+E+CF+ T+KAE++D
Sbjct: 438 VELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSY 497
Query: 536 HIILK 540
HIILK
Sbjct: 498 HIILK 502
>gi|7657299 LBP-9 [Homo sapiens]
Length = 479
Score = 629 bits (1623), Expect = e-180
Identities = 321/509 (63%), Positives = 390/509 (76%), Gaps = 48/509 (9%)
Query: 32 AGAYSMSDVLALPIFKQEDSSLPLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQS 91
+G+Y + DVLALPIFKQE+ L + E PP QYV+CAATSPAVKLH+ETLTYLNQGQS
Sbjct: 16 SGSY-LRDVLALPIFKQEEPQLSPENEARLPPLQYVLCAATSPAVKLHEETLTYLNQGQS 74
Query: 92 YEIRMLDNRKMGDMPEINGKLVKSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDI 151
YEIR+L+NRK+GD ++N K VKSIIRVVFHDRRLQYTEHQQLEGW+W+RPGDR+LD+DI
Sbjct: 75 YEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEHQQLEGWRWSRPGDRILDIDI 134
Query: 152 PMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVD 211
P+SVGI+D R +P+QLNAVEFLWDPAKR SAFIQVHCISTEFTPRKHGGEKGVPFR+Q+D
Sbjct: 135 PLSVGILDPRASPTQLNAVEFLWDPAKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQID 194
Query: 212 TFKQNENGEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTIL 271
TFKQNENGEYT+HLHSASCQIKVFKPKGADRKQKTDREKMEKRTA EKEKYQPSY+TTIL
Sbjct: 195 TFKQNENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQEKEKYQPSYETTIL 254
Query: 272 TEMRLEPIIEDAVEHEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTF 331
TE CSPWPD AY NS +P+P++
Sbjct: 255 TE------------------------------------CSPWPDV--AYQVNS-APSPSY 275
Query: 332 TSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSN 391
S + + N+S P H + A + + PSA+IQ+ QQWL +NRFS + RLF++
Sbjct: 276 NGSPNSF-GLGEGNAS-PTHPVE-ALPVGSDHLLPSASIQDAQQWLHRNRFSQFCRLFAS 332
Query: 392 FSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAA 451
FSGADLLK++++DLVQICG ADGIRL+N++K R+VRP++TIYVC+E + V QQ+
Sbjct: 333 FSGADLLKMSRDDLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQELEQNRV-PLQQKRD 391
Query: 452 SSASENGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQ 511
S N S VYHAI+LEE+ E+ K+A +++I I++VYRQGPTGIH++VS++
Sbjct: 392 GSGDSNLS----VYHAIFLEELTTLELIEKIANLYSISPQHIHRVYRQGPTGIHVVVSNE 447
Query: 512 MVQNFQDESCFLFSTVKAESSDGIHIILK 540
MVQNFQDESCF+ ST+KAES+DG HIILK
Sbjct: 448 MVQNFQDESCFVLSTIKAESNDGYHIILK 476
>gi|239735569 grainyhead-like 1 [Homo sapiens]
Length = 618
Score = 101 bits (252), Expect = 2e-21
Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 8/212 (3%)
Query: 64 FQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVVFHD 123
F+Y + A+ S K D T+TYLN+GQ Y I + + + K V+S+I VVF +
Sbjct: 252 FEYTLEASKSLRQKPGDSTMTYLNKGQFYPITLKEVSSSEGIHHPISK-VRSVIMVVFAE 310
Query: 124 RRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVEFLWDPAKRTS 181
+ + + + + W + + +DI +T +N ++ NA+ F WD
Sbjct: 311 DKSREDQLRHWKYWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYNAISFTWDINDEAK 370
Query: 182 AFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGAD 241
FI V+C+ST+F+ +K G KG+P IQVDT+ N +H A CQIKVF KGA+
Sbjct: 371 VFISVNCLSTDFSSQK--GVKGLPLNIQVDTYSYNNRSNKP--VHRAYCQIKVFCDKGAE 426
Query: 242 RKQKTDREKMEKRTAHE-KEKYQPSYDTTILT 272
RK + + K KR + K PS+ +T
Sbjct: 427 RKIRDEERKQSKRKVSDVKVPLLPSHKRMDIT 458
>gi|170784817 transcription factor CP2-like 3 [Homo sapiens]
Length = 625
Score = 97.1 bits (240), Expect = 4e-20
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 58 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKL--VKS 115
+T FQY + A S K + +TYLN+GQ Y I + + GD + V+S
Sbjct: 242 QTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSET---GDNKCFRHPISKVRS 298
Query: 116 IIRVVFHDRRLQYTEHQQLEGWKW-----NRPGDRLLDL-DIPMSVGIIDTRTNPSQLNA 169
++ VVF + + +QL+ WK+ + R+LD+ D S I NA
Sbjct: 299 VVMVVFSEDK---NRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGN-IEEIAYNA 354
Query: 170 VEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSAS 229
V F WD + FI V+C+ST+F+ +K G KG+P IQ+DT+ N +H A
Sbjct: 355 VSFTWDVNEEAKIFITVNCLSTDFSSQK--GVKGLPLMIQIDTYSYNNRS--NKPIHRAY 410
Query: 230 CQIKVFKPKGADRKQKTDREKMEKR 254
CQIKVF KGA+RK + + K ++
Sbjct: 411 CQIKVFCDKGAERKIRDEERKQNRK 435
>gi|38049009 sister-of-mammalian grainyhead protein isoform 2 [Homo
sapiens]
Length = 602
Score = 96.3 bits (238), Expect = 6e-20
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 221 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 279
Query: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 280 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 339
Query: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 340 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 394
Query: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKK 290
QIK+F KGA+RK + D K +R + +L+ R E + +
Sbjct: 395 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLET 454
Query: 291 SSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCS 340
+P + SL + G +P S P+ + P + TCS
Sbjct: 455 PPVLFIPNVHFSSLQRSGGAAP-----------SAGPSSSNRLPLKRTCS 493
>gi|42789723 sister-of-mammalian grainyhead protein isoform 3 [Homo
sapiens]
Length = 509
Score = 96.3 bits (238), Expect = 6e-20
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 128 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 186
Query: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 187 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 246
Query: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 247 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 301
Query: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKK 290
QIK+F KGA+RK + D K +R + +L+ R E + +
Sbjct: 302 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLET 361
Query: 291 SSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCS 340
+P + SL + G +P S P+ + P + TCS
Sbjct: 362 PPVLFIPNVHFSSLQRSGGAAP-----------SAGPSSSNRLPLKRTCS 400
>gi|38049007 sister-of-mammalian grainyhead protein isoform 1 [Homo
sapiens]
Length = 607
Score = 96.3 bits (238), Expect = 6e-20
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 226 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 284
Query: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 285 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 344
Query: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 345 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 399
Query: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKK 290
QIK+F KGA+RK + D K +R + +L+ R E + +
Sbjct: 400 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLET 459
Query: 291 SSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCS 340
+P + SL + G +P S P+ + P + TCS
Sbjct: 460 PPVLFIPNVHFSSLQRSGGAAP-----------SAGPSSSNRLPLKRTCS 498
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 37.7 bits (86), Expect = 0.027
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 28/170 (16%)
Query: 201 EKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEK--RTAHE 258
E G P R K++E T H S + +G + Q++ EK E+ E
Sbjct: 930 EAGEPGRPGTKPPKRDEERGKTQGKHRKSFALD---SEGEEASQESSSEKDEEDDEEDEE 986
Query: 259 KEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPT 318
E + + DTT + E + D + E SSK +L AD
Sbjct: 987 DEDREEAVDTT-----KKETEVSDGEDEESDSSSKCSLYADSDGE--------------- 1026
Query: 319 AYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSA 368
N+S S + + +S S+ S S+SSS + + +S+ E+ +P+A
Sbjct: 1027 ---NDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAA 1073
>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
Length = 694
Score = 37.4 bits (85), Expect = 0.035
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 11/156 (7%)
Query: 296 LPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAP-----TFTSPQQSTCSVPDSNSSSPN 350
LP S KR S S P +P PSP FT+P + S S +SS +
Sbjct: 224 LPCQIHPSPLKR-SMSLIPTSPQV-PGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGS 281
Query: 351 HQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICG 410
Q + + + + +++ WL R Y LFS S +++ LT++ L +
Sbjct: 282 EQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHL-ESQN 340
Query: 411 AADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQG 446
G R +L + +R R ++ E+ VL+G
Sbjct: 341 VTKGARHKIALSIQKLRERQSVLKSLEK---DVLEG 373
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 35.4 bits (80), Expect = 0.13
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 20/175 (11%)
Query: 225 LHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAV 284
+HS S + P A ++K+ E++ KEK P D P AV
Sbjct: 1171 VHSPSTEGPQLPPVPAATQEKSPEERLFPEPLLPKEK--PKADA---------PSDLKAV 1219
Query: 285 EHEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDS 344
H +S TLP ++ SP P P A PSP P + PQ ST + S
Sbjct: 1220 -HSPIRSQPVTLP----EARTPVSPGSPQPQPPVAASTPPPSPLPICSQPQPSTEATVPS 1274
Query: 345 NSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLK 399
+ SP ++TS P A + Q K+R S + +DL++
Sbjct: 1275 PTQSPIRFQPAPAKTS----TPLAPLPVQSQSDTKDRLGSPLAVDEALRRSDLVE 1325
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 35.0 bits (79), Expect = 0.17
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 243 KQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADYGD 302
KQ++ + +R A +K +P+ I+ LE ++ VE QK S++ P + +
Sbjct: 327 KQESVVRRASRRLA-KKTAEEPAASGRIICHSYLERLLN--VEVPQKVGSEQKEPPEEAE 383
Query: 303 SLA-------KRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDG 355
+A + + WP T N++P+P P +SP+ + ++ + Q DG
Sbjct: 384 PVAAAEPEVPENNGNNSWPHNDTEIANSTPNPKPAASSPETPSAGQQEAKTD----QADG 439
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 35.0 bits (79), Expect = 0.17
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 243 KQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADYGD 302
KQ++ + +R A +K +P+ I+ LE ++ VE QK S++ P + +
Sbjct: 327 KQESVVRRASRRLA-KKTAEEPAASGRIICHSYLERLLN--VEVPQKVGSEQKEPPEEAE 383
Query: 303 SLA-------KRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDG 355
+A + + WP T N++P+P P +SP+ + ++ + Q DG
Sbjct: 384 PVAAAEPEVPENNGNNSWPHNDTEIANSTPNPKPAASSPETPSAGQQEAKTD----QADG 439
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 34.7 bits (78), Expect = 0.23
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 31/170 (18%)
Query: 214 KQNE-----NGEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDT 268
K+NE NG +I K + R + +RE E + H +++ +P
Sbjct: 1576 KENEELKQRNGALDQQKDELDVRITALKSQYEGRISRLERELREHQERHLEQRDEPQ--- 1632
Query: 269 TILTEMRLEPIIEDAVEHEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPA 328
EP + V +Q++ + +T PA +RG S D PTA + P
Sbjct: 1633 --------EP--SNKVPEQQRQITLKTTPAS-----GERGIAST-SDPPTANI----KPT 1672
Query: 329 PTFTSPQQSTCSVPDSNSSSPN---HQGDGASQTSGEQIQPSATIQETQQ 375
P ++P + T + N S+P + + P+AT+ T Q
Sbjct: 1673 PVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQ 1722
>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2
[Homo sapiens]
Length = 1461
Score = 34.3 bits (77), Expect = 0.30
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 235 FKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEP--------IIEDAVEH 286
F+ G + Q E + T +P D + +M L I+ED E
Sbjct: 338 FQGMGGEESQSPTMESEKSATP------EPVTDNRDVEDMELSDVEDDGSKIIVEDRKEK 391
Query: 287 EQKKSSKRT-LPADYGDSLAKRGSCSPWPDAPTAY------VNNSPSPAPTFTSP 334
+KS+ T +P ++++K SC+P P TA VN S SP+P P
Sbjct: 392 PAEKSAVSTSVPTKPTENISKASSCTPVPVTMTATPPLPKPVNTSLSPSPALALP 446
>gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
Length = 1378
Score = 34.3 bits (77), Expect = 0.30
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 314 PDAPTAYVNNSPSPA-PTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQE 372
P+A A+V SP A P P++S S+SSS G ++ S ++ + SAT Q
Sbjct: 709 PEASQAHVRVSPGQAAPAMARPRRSRHGPASSSSSSEGEDSAGPARPSQKRPRCSATAQR 768
Query: 373 TQQW 376
W
Sbjct: 769 VAAW 772
>gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens]
Length = 768
Score = 33.5 bits (75), Expect = 0.51
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Query: 236 KPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRT 295
K KG++ RE+ EK + P T I E L P + + K T
Sbjct: 613 KQKGSEENLDEAREQKEKSPPDQPAVPHPPPSTPIKLEEDLVPEPTTG-DDSDAATFKPT 671
Query: 296 LPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDG 355
LP D ++ A+ SP+ APT SP+ + P + ++P+ +G
Sbjct: 672 LPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPTEASPEPAPDPAPVAEEAAPSAVEEG 731
Query: 356 ASQTSGEQIQP 366
A+ G P
Sbjct: 732 AAADPGSDGSP 742
>gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens]
Length = 737
Score = 33.5 bits (75), Expect = 0.51
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Query: 236 KPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRT 295
K KG++ RE+ EK + P T I E L P + + K T
Sbjct: 582 KQKGSEENLDEAREQKEKSPPDQPAVPHPPPSTPIKLEEDLVPEPTTG-DDSDAATFKPT 640
Query: 296 LPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDG 355
LP D ++ A+ SP+ APT SP+ + P + ++P+ +G
Sbjct: 641 LPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPTEASPEPAPDPAPVAEEAAPSAVEEG 700
Query: 356 ASQTSGEQIQP 366
A+ G P
Sbjct: 701 AAADPGSDGSP 711
>gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo
sapiens]
Length = 1674
Score = 33.5 bits (75), Expect = 0.51
Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 47/206 (22%)
Query: 159 DTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNEN 218
D R +P+Q + L P+ +S + H + EKG D + +
Sbjct: 1187 DLRESPAQAPKISDL--PSSMSSEVAEGHSLEAT--------EKG-------DLRQDPKT 1229
Query: 219 GEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEP 278
G + +H+ K AD ++ T + ++T+HE + P ++TT
Sbjct: 1230 GSFPEHITQE-------KAPAADTEEFTTEDG--EKTSHELQSVCP-WETTAPA------ 1273
Query: 279 IIEDAVEH------EQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFT 332
D+V H +Q K+S + L + G + PW D P A V S S A T
Sbjct: 1274 ---DSVSHLDRQRPDQPKASSQRLVSTGG----RAADVCPW-DVPDAGVYKSDSSAKAET 1325
Query: 333 SPQQSTCSVPDSNSSSPNHQGDGASQ 358
P + T +P S + +GD +
Sbjct: 1326 CPWEVTERIPVKGVSRQDGKGDSQEE 1351
>gi|93352554 GPR158-like 1 [Homo sapiens]
Length = 2367
Score = 33.5 bits (75), Expect = 0.51
Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 47/206 (22%)
Query: 159 DTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNEN 218
D R +P+Q + L P+ +S + H + EKG D + +
Sbjct: 1880 DLRESPAQAPKISDL--PSSMSSEVAEGHSLEAT--------EKG-------DLRQDPKT 1922
Query: 219 GEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEP 278
G + +H+ K AD ++ T + ++T+HE + P ++TT
Sbjct: 1923 GSFPEHITQE-------KAPAADTEEFTTEDG--EKTSHELQSVCP-WETTAPA------ 1966
Query: 279 IIEDAVEH------EQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFT 332
D+V H +Q K+S + L + G + PW D P A V S S A T
Sbjct: 1967 ---DSVSHLDRQRPDQPKASSQRLVSTGG----RAADVCPW-DVPDAGVYKSDSSAKAET 2018
Query: 333 SPQQSTCSVPDSNSSSPNHQGDGASQ 358
P + T +P S + +GD +
Sbjct: 2019 CPWEVTERIPVKGVSRQDGKGDSQEE 2044
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 33.1 bits (74), Expect = 0.66
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 245 KTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADYGDSL 304
KT R T+ E P + +T L P + HE + ++ ++ P+ S
Sbjct: 231 KTTRLPDNTTTSGLLEASTPVHSSTGSPHTTLSP--SSSTTHEGEPTTFQSWPSSKDTSP 288
Query: 305 AKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
A G+ S + T Y ++SPS PT T S+ ++ S S+P H A+ T+
Sbjct: 289 APSGTTSAFVKLSTTY-HSSPSSTPT-THFSASSTTLGHSEESTPVHSSPVATATT 342
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 33.1 bits (74), Expect = 0.66
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 245 KTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADYGDSL 304
KT R T+ E P + +T L P + HE + ++ ++ P+ S
Sbjct: 375 KTTRLPDNTTTSGLLEASTPVHSSTGSPHTTLSP--SSSTTHEGEPTTFQSWPSSKDTSP 432
Query: 305 AKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
A G+ S + T Y ++SPS PT T S+ ++ S S+P H A+ T+
Sbjct: 433 APSGTTSAFVKLSTTY-HSSPSSTPT-THFSASSTTLGHSEESTPVHSSPVATATT 486
Score = 30.4 bits (67), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 286 HEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSN 345
H S + TL S +G + + P A + +PSP T T+P + + + S
Sbjct: 1110 HSSTGSPRTTLSPASSTSPGLQGESTAFQTHP-ASTHTTPSPPSTATAPVEESTTYHRSP 1168
Query: 346 SSSPNHQGDGASQTSG 361
S+P +S TSG
Sbjct: 1169 GSTPTTHFPASSTTSG 1184
Score = 30.4 bits (67), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 286 HEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSN 345
H S + TL S +G + + P A + +PSP T T+P + + + S
Sbjct: 2193 HSSTGSPRTTLSPASSTSPGLQGESTAFQTHP-ASTHTTPSPPSTATAPVEESTTYHRSP 2251
Query: 346 SSSPNHQGDGASQTSG 361
S+P +S TSG
Sbjct: 2252 GSTPTTHFPASSTTSG 2267
Score = 30.4 bits (67), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 286 HEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSN 345
H S + TL S +G + + P A + +PSP T T+P + + + S
Sbjct: 2667 HSSTGSPRTTLSPASSTSPGLQGESTTFQTHP-ASTHTTPSPPSTATAPVEESTTYHRSP 2725
Query: 346 SSSPNHQGDGASQTSG 361
S+P +S TSG
Sbjct: 2726 GSTPTTHFPASSTTSG 2741
Score = 30.4 bits (67), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 286 HEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSN 345
H S + TL S +G + + P A + +PSP T T+P + + + S
Sbjct: 3750 HSSTGSPRTTLSPASSTSPGLQGESTAFQTHP-ASTHTTPSPPSTATAPVEESTTYHRSP 3808
Query: 346 SSSPNHQGDGASQTSG 361
S+P +S TSG
Sbjct: 3809 GSTPTTHFPASSTTSG 3824
>gi|29789379 sphingomyelin synthase 1 [Homo sapiens]
Length = 413
Score = 33.1 bits (74), Expect = 0.66
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 371 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 404
++ WLL+N Y +F+G DL+ LT+ED
Sbjct: 10 KKVADWLLENAMPEYCEPLEHFTGQDLINLTQED 43
>gi|62244004 modulator of estrogen induced transcription isoform b
[Homo sapiens]
Length = 1016
Score = 33.1 bits (74), Expect = 0.66
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 282 DAVEHEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSV 341
D VE E ++SSK+ D K+G P++ + + + + S T S
Sbjct: 297 DPVEKEARESSKKAESGDKEKDTLKKG--------PSSTGASGQAKSSSKESKDSKTSSK 348
Query: 342 PDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFS 390
D S+S G+S +S + I S T+ LKN F Y ++ S
Sbjct: 349 DDKGSTSST---SGSSGSSTKNIWVSGLSSNTKAADLKNLFGKYGKVLS 394
>gi|63176611 modulator of estrogen induced transcription isoform a
[Homo sapiens]
Length = 1034
Score = 33.1 bits (74), Expect = 0.66
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 282 DAVEHEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSV 341
D VE E ++SSK+ D K+G P++ + + + + S T S
Sbjct: 315 DPVEKEARESSKKAESGDKEKDTLKKG--------PSSTGASGQAKSSSKESKDSKTSSK 366
Query: 342 PDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFS 390
D S+S G+S +S + I S T+ LKN F Y ++ S
Sbjct: 367 DDKGSTSST---SGSSGSSTKNIWVSGLSSNTKAADLKNLFGKYGKVLS 412
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 33.1 bits (74), Expect = 0.66
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 10/145 (6%)
Query: 311 SPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATI 370
S + PT ++S +P+ +TS + S SN S + G Q++ + T
Sbjct: 530 SDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQST------TYTS 583
Query: 371 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRL 430
Q Q L + S+ TR + + + ++DL Q ++ ++SV
Sbjct: 584 QNNAQGPLYEQRSTQTRRYP----SSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGAT 639
Query: 431 TIYVCREQPSSTVLQGQQQAASSAS 455
V + PS++ + + S+AS
Sbjct: 640 GSAVKSDSPSTSSIPPLNETVSAAS 664
>gi|188497756 ubiquitin associated protein 2-like isoform b [Homo
sapiens]
Length = 983
Score = 33.1 bits (74), Expect = 0.66
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 10/145 (6%)
Query: 311 SPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATI 370
S + PT ++S +P+ +TS + S SN S + G Q++ + T
Sbjct: 530 SDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQST------TYTS 583
Query: 371 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRL 430
Q Q L + S+ TR + + + ++DL Q ++ ++SV
Sbjct: 584 QNNAQGPLYEQRSTQTRRYP----SSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGAT 639
Query: 431 TIYVCREQPSSTVLQGQQQAASSAS 455
V + PS++ + + S+AS
Sbjct: 640 GSAVKSDSPSTSSIPPLNETVSAAS 664
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 32.7 bits (73), Expect = 0.86
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 245 KTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADYGDSL 304
KT R T+ E P + +T L P + HE + ++ ++ P+ S
Sbjct: 296 KTTRLPDNTTTSGLLEASTPVHSSTGSPHTTLSPA--SSTTHEGEPTTFQSWPSSKDTSP 353
Query: 305 AKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
A G+ S + T Y ++SPS PT T S+ ++ S S+P H A+ T+
Sbjct: 354 APSGTTSAFVKLSTTY-HSSPSSTPT-THFSASSTTLGHSEESTPVHSSPVATATT 407
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,433,532
Number of Sequences: 37866
Number of extensions: 1046283
Number of successful extensions: 4678
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 4545
Number of HSP's gapped (non-prelim): 202
length of query: 540
length of database: 18,247,518
effective HSP length: 107
effective length of query: 433
effective length of database: 14,195,856
effective search space: 6146805648
effective search space used: 6146805648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.