Guide to the Human Genome
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Name: GRHL3 Sequence: fasta or formatted (607aa) NCBI GI: 38049007
Description:

sister-of-mammalian grainyhead protein isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [602aa] sister-of-mammalian grainyhead protein isoform 2
alt prot [509aa] sister-of-mammalian grainyhead protein isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         29           2
 C cysteine            1.6         10           1
 D aspartate           5.8         35           3
 E glutamate           7.1         43           2
 F phenylalanine       4.3         26           1
 G glycine             6.3         38           2
 H histidine           1.8         11           1
 I isoleucine          3.6         22           2
 K lysine              7.7         47           2
 L leucine            10.2         62           2
 M methionine          2.6         16           2
 N asparagine          5.1         31           2
 P proline             7.2         44           2
 Q glutamine           3.0         18           1
 R arginine            4.6         28           2
 S serine              8.1         49           3
 T threonine           5.3         32           2
 V valine              6.1         37           2
 W tryptophan          1.0          6           1
 Y tyrosine            3.8         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sister-of-mammalian grainyhead protein isoform 1 [Ho... 
GRHL3                 0.981   sister-of-mammalian grainyhead protein isoform 2 [Ho...
GRHL3                 0.836   sister-of-mammalian grainyhead protein isoform 3 [Ho...
GRHL2                 0.385   transcription factor CP2-like 3 
GRHL1                 0.379   grainyhead-like 1 
TFCP2L1               0.064   LBP-9 
UBP1                  0.060   upstream binding protein 1 (LBP-1a) isoform b [Homo...
TFCP2                 0.058   transcription factor CP2 
UBP1                  0.058   upstream binding protein 1 (LBP-1a) isoform a [Homo...
UBP1                  0.058   upstream binding protein 1 (LBP-1a) isoform a [Homo...
WIPF1                 0.011   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.011   WAS/WASL interacting protein family, member 1 
C1orf113              0.007   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.007   SH3 domain-containing protein C1orf113 isoform 2 [H...
HOOK1                 0.007   hook homolog 1 
TACC3                 0.007   transforming, acidic coiled-coil containing protein 3...
SNAP91                0.006   synaptosomal-associated protein, 91kDa homolog 
RNF19A                0.006   ring finger protein 19 
RNF19A                0.006   ring finger protein 19 
MPRIP                 0.006   myosin phosphatase-Rho interacting protein isoform 2...
MPRIP                 0.006   myosin phosphatase-Rho interacting protein isoform 1...
HHEX                  0.006   hematopoietically expressed homeobox 
DENND4B               0.006   DENN/MADD domain containing 4B 
YTHDF3                0.005   YTH domain family, member 3 
COL5A1                0.005   alpha 1 type V collagen preproprotein 
TRIO                  0.005   triple functional domain (PTPRF interacting) 
RAI1                  0.005   retinoic acid induced 1 
GPRIN1                0.005   G protein-regulated inducer of neurite outgrowth 1 ...
RPAP3                 0.004   RNA polymerase II associated protein 3 isoform 3 [H...
RPAP3                 0.004   RNA polymerase II associated protein 3 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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