UBP1 10435

Name: UBP1	Sequence: fasta or formatted (540aa)		NCBI GI: 189491634
Description: upstream binding protein 1 (LBP-1a) isoform a		Referenced in: Additional Genes in Development
Other entries for this name: alt mRNA [540aa] upstream binding protein 1 (LBP-1a) isoform a alt prot [504aa] upstream binding protein 1 (LBP-1a) isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 34 2 C cysteine 1.5 8 1 D aspartate 5.9 32 1 E glutamate 6.5 35 2 F phenylalanine 3.3 18 1 G glycine 5.7 31 2 H histidine 3.0 16 1 I isoleucine 5.7 31 2 K lysine 5.7 31 2 L leucine 8.0 43 2 M methionine 2.2 12 1 N asparagine 3.5 19 2 P proline 5.7 31 2 Q glutamine 6.9 37 3 R arginine 4.8 26 2 S serine 9.8 53 3 T threonine 5.7 31 2 V valine 5.4 29 2 W tryptophan 1.1 6 1 Y tyrosine 3.1 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 upstream binding protein 1 (LBP-1a) isoform a [Homo... UBP1 1.000 upstream binding protein 1 (LBP-1a) isoform a [Homo... UBP1 0.917 upstream binding protein 1 (LBP-1a) isoform b [Homo... TFCP2 0.665 transcription factor CP2 TFCP2L1 0.567 LBP-9 GRHL1 0.071 grainyhead-like 1 GRHL2 0.068 transcription factor CP2-like 3 GRHL3 0.067 sister-of-mammalian grainyhead protein isoform 2 [Ho... GRHL3 0.067 sister-of-mammalian grainyhead protein isoform 3 [Ho... GRHL3 0.067 sister-of-mammalian grainyhead protein isoform 1 [Ho... SETD1A 0.012 SET domain containing 1A SAMD4B 0.011 sterile alpha motif domain containing 4B MICAL3 0.009 microtubule associated monoxygenase, calponin and L... INCENP 0.009 inner centromere protein antigens 135/155kDa isofor... INCENP 0.009 inner centromere protein antigens 135/155kDa isofor... TPR 0.009 nuclear pore complex-associated protein TPR RPRD2 0.008 Regulation of nuclear pre-mRNA domain containing 2 ... NFKBIL2 0.008 NF-kappa-B inhibitor-like protein 2 ADD1 0.008 adducin 1 (alpha) isoform b ADD1 0.008 adducin 1 (alpha) isoform a LOC100290717 0.008 PREDICTED: hypothetical protein XP_002347797 GPR179 0.008 GPR158-like 1 LOC100133714 0.008 PREDICTED: similar to Mucin-12, partial MUC12 0.008 PREDICTED: mucin 12 SGMS1 0.008 sphingomyelin synthase 1 SLTM 0.008 modulator of estrogen induced transcription isoform ... SLTM 0.008 modulator of estrogen induced transcription isoform ... UBAP2L 0.008 ubiquitin associated protein 2-like isoform a [Homo... UBAP2L 0.008 ubiquitin associated protein 2-like isoform b [Homo... MUC12 0.008 PREDICTED: mucin 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.