SGMS1 25073

Name: SGMS1	Sequence: fasta or formatted (413aa)		NCBI GI: 29789379
Description: sphingomyelin synthase 1		Referenced in: Sphingomyelin, Ceramides, and Glycolipids Additional Interaction Domain Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 14 1 C cysteine 2.4 10 1 D aspartate 3.4 14 1 E glutamate 4.8 20 1 F phenylalanine 4.8 20 2 G glycine 5.3 22 3 H histidine 4.1 17 2 I isoleucine 6.3 26 2 K lysine 5.1 21 2 L leucine 10.9 45 3 M methionine 4.1 17 1 N asparagine 3.9 16 1 P proline 6.3 26 2 Q glutamine 3.4 14 2 R arginine 4.6 19 2 S serine 5.1 21 2 T threonine 5.1 21 2 V valine 7.5 31 3 W tryptophan 4.1 17 2 Y tyrosine 5.3 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sphingomyelin synthase 1 SGMS2 0.506 sphingomyelin synthase 2 SGMS2 0.506 sphingomyelin synthase 2 SGMS2 0.506 sphingomyelin synthase 2 SAMD8 0.180 sterile alpha motif domain containing 8 CNKSR3 0.012 CNKSR family member 3 PPFIBP1 0.009 PTPRF interacting protein binding protein 1 isoform ... UBP1 0.009 upstream binding protein 1 (LBP-1a) isoform a [Homo... UBP1 0.009 upstream binding protein 1 (LBP-1a) isoform b [Homo... UBP1 0.009 upstream binding protein 1 (LBP-1a) isoform a [Homo... CNKSR2 0.009 connector enhancer of kinase suppressor of Ras 2 [Ho... GRID1 0.006 glutamate receptor, ionotropic, delta 1 precursor [H... C14orf174 0.006 hypothetical protein LOC161394 TFCP2 0.006 transcription factor CP2 BFAR 0.006 bifunctional apoptosis regulator LOC100128672 0.005 PREDICTED: hypothetical protein LOC100128672 0.005 PREDICTED: hypothetical protein LOC100128672 0.005 PREDICTED: hypothetical protein ANK2 0.005 ankyrin 2 isoform 3 ANK2 0.005 ankyrin 2 isoform 2 ANK2 0.005 ankyrin 2 isoform 1 PPP2CB 0.005 protein phosphatase 2, catalytic subunit, beta isofo... PPP2CB 0.005 protein phosphatase 2, catalytic subunit, beta isofor... ELOVL5 0.005 elongation of very long chain fatty acids-like 5 [Ho... SLC26A6 0.005 solute carrier family 26, member 6 isoform 4 SLC26A6 0.005 solute carrier family 26, member 6 isoform 3 SLC26A6 0.005 solute carrier family 26, member 6 isoform 2 SLC26A6 0.005 solute carrier family 26, member 6 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.