Guide to the Human Genome
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Name: GPR179 Sequence: fasta or formatted (2367aa) NCBI GI: 93352554
Description:

GPR158-like 1

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4        222           3
 C cysteine            2.5         60           2
 D aspartate           4.1         97           2
 E glutamate           9.6        228           2
 F phenylalanine       2.2         52           3
 G glycine             8.4        199           3
 H histidine           1.8         43           2
 I isoleucine          2.2         52           2
 K lysine              5.0        118           2
 L leucine             9.2        217           4
 M methionine          1.6         39           2
 N asparagine          1.4         34           2
 P proline             8.5        202           3
 Q glutamine           5.3        126           3
 R arginine            6.5        155           3
 S serine              9.3        219           3
 T threonine           4.4        105           3
 V valine              5.2        123           2
 W tryptophan          1.9         46           1
 Y tyrosine            1.3         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GPR158-like 1 
LOC100290717          0.595   PREDICTED: hypothetical protein XP_002347797 
GPR158                0.144   G protein-coupled receptor 158 
NES                   0.008   nestin 
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform c ...
SRRM2                 0.008   splicing coactivator subunit SRm300 
NEFH                  0.008   neurofilament, heavy polypeptide 200kDa 
GABBR2                0.007   G protein-coupled receptor 51 
RP1L1                 0.007   retinitis pigmentosa 1-like 1 
GRM1                  0.007   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM3                  0.006   glutamate receptor, metabotropic 3 precursor 
GRM5                  0.006   glutamate receptor, metabotropic 5 isoform a precur...
GRM5                  0.006   glutamate receptor, metabotropic 5 isoform b precurso...
GPRIN1                0.005   G protein-regulated inducer of neurite outgrowth 1 ...
FLJ22184              0.005   PREDICTED: hypothetical protein LOC80164 
NOLC1                 0.005   nucleolar and coiled-body phosphoprotein 1 
GABBR1                0.005   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GABBR1                0.005   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.005   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GRM1                  0.005   glutamate receptor, metabotropic 1 isoform beta pre...
FBRS                  0.005   fibrosin 
SRRM1                 0.005   serine/arginine repetitive matrix 1 
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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