Guide to the Human Genome
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Name: CIAPIN1 Sequence: fasta or formatted (312aa) NCBI GI: 89274169
Description:

cytokine induced apoptosis inhibitor 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         27           3
 C cysteine            3.2         10           1
 D aspartate           6.1         19           2
 E glutamate           8.3         26           2
 F phenylalanine       2.6          8           1
 G glycine             6.4         20           2
 H histidine           1.6          5           1
 I isoleucine          3.2         10           2
 K lysine              9.0         28           2
 L leucine            12.2         38           2
 M methionine          1.6          5           1
 N asparagine          3.2         10           2
 P proline             5.4         17           1
 Q glutamine           3.2         10           1
 R arginine            3.2         10           1
 S serine             10.9         34           2
 T threonine           3.5         11           2
 V valine              6.4         20           2
 W tryptophan          0.6          2           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytokine induced apoptosis inhibitor 1 
MYLK                  0.015   myosin light chain kinase isoform 3A 
MYLK                  0.015   myosin light chain kinase isoform 1 
MYLK                  0.015   myosin light chain kinase isoform 3B 
MYLK                  0.015   myosin light chain kinase isoform 2 
CLEC16A               0.013   C-type lectin domain family 16, member A 
C9orf11               0.012   Acr formation associated factor isoform 2 
KIAA1618              0.012   hypothetical protein LOC57714 
METTL7B               0.012   methyltransferase like 7B 
ADAM9                 0.010   ADAM metallopeptidase domain 9 isoform 1 precursor [H...
BOD1L                 0.010   biorientation of chromosomes in cell division 1-like...
METTL7A               0.010   methyltransferase like 7A 
MADCAM1               0.008   mucosal vascular addressin cell adhesion molecule 1 ...
UTP14A                0.008   UTP14, U3 small nucleolar ribonucleoprotein, homolog...
CMYA5                 0.008   cardiomyopathy associated 5 
ATXN3                 0.008   ataxin 3 isoform 4 
BBS5                  0.008   Bardet-Biedl syndrome 5 
BTBD12                0.008   BTB (POZ) domain containing 12 
CCDC154               0.007   coiled-coil domain containing 154 
FAM134C               0.007   hypothetical protein LOC162427 
PCM1                  0.007   pericentriolar material 1 
EEF1D                 0.007   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.007   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.007   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.007   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.007   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 0.007   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 0.007   eukaryotic translation elongation factor 1 delta is...
WRN                   0.005   Werner syndrome protein 
LOC652522             0.005   PREDICTED: similar to Werner syndrome ATP-dependent...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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