Guide to the Human Genome
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Name: ICAM4 Sequence: fasta or formatted (271aa) NCBI GI: 4504561
Description:

intercellular adhesion molecule 4 isoform 1 precursor

Referenced in:

Additional Immunoglobulin-related Receptors
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [237aa] intercellular adhesion molecule 4 isoform 2 precursor
alt prot [272aa] intercellular adhesion molecule 4 isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         27           3
 C cysteine            3.0          8           1
 D aspartate           1.5          4           1
 E glutamate           1.8          5           1
 F phenylalanine       3.3          9           2
 G glycine             7.4         20           1
 H histidine           1.8          5           1
 I isoleucine          2.6          7           1
 K lysine              3.7         10           1
 L leucine            12.9         35           2
 M methionine          1.5          4           1
 N asparagine          2.2          6           1
 P proline             8.1         22           2
 Q glutamine           3.7         10           1
 R arginine            6.6         18           2
 S serine             10.0         27           2
 T threonine           6.3         17           1
 V valine              8.5         23           2
 W tryptophan          2.2          6           1
 Y tyrosine            3.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   intercellular adhesion molecule 4 isoform 1 precursor... 
ICAM4                 0.863   intercellular adhesion molecule 4 isoform 2 precurso...
ICAM4                 0.474   intercellular adhesion molecule 4 isoform 3 precurso...
ICAM5                 0.126   intercellular adhesion molecule 5 precursor 
ICAM2                 0.101   intercellular adhesion molecule 2 precursor 
ICAM2                 0.101   intercellular adhesion molecule 2 precursor 
ICAM2                 0.101   intercellular adhesion molecule 2 precursor 
ICAM2                 0.101   intercellular adhesion molecule 2 precursor 
ICAM2                 0.101   intercellular adhesion molecule 2 precursor 
ICAM3                 0.091   intercellular adhesion molecule 3 precursor 
ICAM1                 0.055   intercellular adhesion molecule 1 precursor 
VCAM1                 0.053   vascular cell adhesion molecule 1 isoform a precursor...
VCAM1                 0.038   vascular cell adhesion molecule 1 isoform b precurso...
DISP2                 0.023   dispatched B 
LOC100293453          0.019   PREDICTED: hypothetical protein 
LOC100288459          0.019   PREDICTED: hypothetical protein 
LOC100288459          0.019   PREDICTED: hypothetical protein XP_002343705 
PKD1L1                0.015   polycystin-1L1 
DUSP8                 0.013   dual specificity phosphatase 8 
MADCAM1               0.013   mucosal vascular addressin cell adhesion molecule 1 ...
TENC1                 0.011   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.011   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.011   tensin like C1 domain containing phosphatase isoform...
HLA-DPA1              0.010   major histocompatibility complex, class II, DP alpha...
MADCAM1               0.010   mucosal vascular addressin cell adhesion molecule 1...
PCDHGC5               0.010   protocadherin gamma subfamily C, 5 isoform 1 precurs...
SRRM2                 0.010   splicing coactivator subunit SRm300 
PCDHGC5               0.008   protocadherin gamma subfamily C, 5 isoform 2 precurs...
NEO1                  0.008   neogenin homolog 1 
SLC25A46              0.008   solute carrier family 25, member 46 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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