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Search of human proteins with 100913211
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|100913211 heat shock transcription factor 4 isoform a [Homo
sapiens]
(462 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|100913211 heat shock transcription factor 4 isoform a [Homo s... 938 0.0
gi|100913209 heat shock transcription factor 4 isoform b [Homo s... 826 0.0
gi|5031767 heat shock transcription factor 1 [Homo sapiens] 261 7e-70
gi|207113147 heat shock transcription factor 2 isoform b [Homo s... 193 3e-49
gi|4758568 heat shock transcription factor 2 isoform a [Homo sap... 193 3e-49
gi|122937277 heat shock transcription factor family member 5 [Ho... 60 3e-09
gi|239752444 PREDICTED: similar to heat shock transcription fact... 51 3e-06
gi|239746964 PREDICTED: similar to heat shock transcription fact... 51 3e-06
gi|50312655 heat shock transcription factor, Y-linked 1 isoform ... 50 3e-06
gi|32526913 heat shock transcription factor, Y linked 2 isoform ... 50 3e-06
gi|169216697 PREDICTED: heat shock transcription factor family, ... 46 8e-05
gi|7706603 heat shock transcription factor family, X linked 1 [H... 46 8e-05
gi|153792074 proline rich 12 [Homo sapiens] 44 3e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 4e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 4e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 42 9e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 42 9e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 42 9e-04
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 42 9e-04
gi|24211017 heat shock transcription factor, Y-linked 1 isoform ... 42 0.002
gi|50312659 heat shock transcription factor, Y linked 2 isoform ... 42 0.002
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 41 0.002
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 40 0.004
gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens] 40 0.004
gi|91208420 bassoon protein [Homo sapiens] 39 0.008
gi|153251840 zinc finger protein 839 [Homo sapiens] 39 0.008
gi|7706501 WW domain binding protein 11 [Homo sapiens] 39 0.008
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.013
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 39 0.013
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 38 0.017
>gi|100913211 heat shock transcription factor 4 isoform a [Homo
sapiens]
Length = 462
Score = 938 bits (2424), Expect = 0.0
Identities = 462/462 (100%), Positives = 462/462 (100%)
Query: 1 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP 60
MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
Sbjct: 1 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP 60
Query: 61 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
Sbjct: 61 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
Query: 121 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ 180
VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
Sbjct: 121 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ 180
Query: 181 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF 240
QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
Sbjct: 181 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF 240
Query: 241 IQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQ 300
IQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQ
Sbjct: 241 IQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQ 300
Query: 301 AILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVE 360
AILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVE
Sbjct: 301 AILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVE 360
Query: 361 PAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAP 420
PAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAP
Sbjct: 361 PAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAP 420
Query: 421 LLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP 462
LLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
Sbjct: 421 LLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP 462
>gi|100913209 heat shock transcription factor 4 isoform b [Homo
sapiens]
Length = 492
Score = 826 bits (2133), Expect = 0.0
Identities = 426/492 (86%), Positives = 431/492 (87%), Gaps = 30/492 (6%)
Query: 1 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP 60
MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
Sbjct: 1 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP 60
Query: 61 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
Sbjct: 61 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
Query: 121 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ 180
VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
Sbjct: 121 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ 180
Query: 181 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF 240
QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
Sbjct: 181 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF 240
Query: 241 IQSP---STYSLSQRQIWALALTGPGAPSSLTSQKTLHPL------RGPGFL--PPVMAG 289
IQSP + LS + ++ S L P +G L P G
Sbjct: 241 IQSPLPETNLGLSPHRARGPIISDIPEDSPSPEGTRLSPSSDGRREKGLALLKEEPASPG 300
Query: 290 -------------------APPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPD 330
APPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPD
Sbjct: 301 GDGEAGLALAPNECDFCVTAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPD 360
Query: 331 RGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQ 390
RGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQ
Sbjct: 361 RGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQ 420
Query: 391 PLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRT 450
PLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRT
Sbjct: 421 PLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRT 480
Query: 451 ASYLGPEASPSP 462
ASYLGPEASPSP
Sbjct: 481 ASYLGPEASPSP 492
>gi|5031767 heat shock transcription factor 1 [Homo sapiens]
Length = 529
Score = 261 bits (668), Expect = 7e-70
Identities = 182/465 (39%), Positives = 240/465 (51%), Gaps = 68/465 (14%)
Query: 9 PTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNM 68
P GPS VPAFL KLW LV DP TD LI WSPSG SF V DQ +FAKEVLP+YFKH+NM
Sbjct: 7 PGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNM 66
Query: 69 ASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPA---LR 125
ASFVRQLNMYGFRKVV IEQGGL++PERD EFQHP F+RG+EQLLE ++RKV + L+
Sbjct: 67 ASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVSTLK 126
Query: 126 GDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQQHRVI 185
+D + R + + +LL +VQ ++G QE +++L ++ +NE LWREV +LRQ H QQ +V+
Sbjct: 127 SEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHAQQQKVV 186
Query: 186 GKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQDPYFIQSP 244
KLIQ L +Q+ G KRK+ LML D GS+ P L PY SP
Sbjct: 187 NKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPYSAPSP 245
Query: 245 STYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPG---------FLPPVMAGAPPPLP 295
+ S S A+A +GP S +T P+ PG P V PP P
Sbjct: 246 AYSSSSLYAPDAVASSGP-IISDITELAPASPMASPGGSIDERPLSSSPLVRVKEEPPSP 304
Query: 296 -------------------------------------VAVVQAILEGKGSFSPEG----P 314
A V A+ + +G EG P
Sbjct: 305 PQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGRPPSP 364
Query: 315 RNAQQPEPG------DPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVL 368
PE D E+ D L++ D + ++L +L SV+ + LD+
Sbjct: 365 PPTSTPEKCLSVACLDKNELSDH----LDAMDSNLDNL--QTMLSSHGFSVDTSALLDLF 418
Query: 369 GPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGK 413
PS+ + +L DLD L+ +Q L+ + P +SP GK
Sbjct: 419 SPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGK 463
>gi|207113147 heat shock transcription factor 2 isoform b [Homo
sapiens]
Length = 518
Score = 193 bits (490), Expect = 3e-49
Identities = 102/201 (50%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 15 SPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQ 74
S VPAFL KLW LV + T+ I WS +G SFLV D+ RFAKE+LP+YFKH+NMASFVRQ
Sbjct: 5 SNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQ 64
Query: 75 LNMYGFRKVVSIEQGGLLRPERD-HVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRP 133
LNMYGFRKVV I+ G+++ ERD VEFQHP F +G++ LLE ++RKV + + ++ + R
Sbjct: 65 LNMYGFRKVVHID-SGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQ 123
Query: 134 EDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQQHRVIGKLIQCLF 193
EDL +++ Q ++ QE+ E+RL EL+ +NE LW+EV LR H QQ +VI K++Q +
Sbjct: 124 EDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIV 183
Query: 194 GPLQAGPSNAGGKRKLSLMLD 214
+Q KRK L+L+
Sbjct: 184 TLVQ-NNQLVSLKRKRPLLLN 203
>gi|4758568 heat shock transcription factor 2 isoform a [Homo
sapiens]
Length = 536
Score = 193 bits (490), Expect = 3e-49
Identities = 102/201 (50%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 15 SPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQ 74
S VPAFL KLW LV + T+ I WS +G SFLV D+ RFAKE+LP+YFKH+NMASFVRQ
Sbjct: 5 SNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQ 64
Query: 75 LNMYGFRKVVSIEQGGLLRPERD-HVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRP 133
LNMYGFRKVV I+ G+++ ERD VEFQHP F +G++ LLE ++RKV + + ++ + R
Sbjct: 65 LNMYGFRKVVHID-SGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQ 123
Query: 134 EDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQQHRVIGKLIQCLF 193
EDL +++ Q ++ QE+ E+RL EL+ +NE LW+EV LR H QQ +VI K++Q +
Sbjct: 124 EDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIV 183
Query: 194 GPLQAGPSNAGGKRKLSLMLD 214
+Q KRK L+L+
Sbjct: 184 TLVQ-NNQLVSLKRKRPLLLN 203
>gi|122937277 heat shock transcription factor family member 5 [Homo
sapiens]
Length = 596
Score = 60.5 bits (145), Expect = 3e-09
Identities = 49/136 (36%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 6 AALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVL------ 59
A L T P+ PA KLW LV P IRW G L+ DQ F E+L
Sbjct: 3 ALLSTPINPNNFPA---KLWRLVNSPRY-RSIRWDGRGEGLLI-DQPLFEAELLSPPGPG 57
Query: 60 -----------PQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHV-EFQHPSFV 107
P+ FK ++ SF+RQLN+YGFRKVV GG + F +P F
Sbjct: 58 GGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFR 117
Query: 108 RGREQLLERVRRKVPA 123
R + QLL ++R A
Sbjct: 118 RDQPQLLVHLKRLTSA 133
>gi|239752444 PREDICTED: similar to heat shock transcription factor
family, X linked 1 [Homo sapiens]
Length = 354
Score = 50.8 bits (120), Expect = 3e-06
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 19 AFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQ-----YFKHSNMASFVR 73
+F KLW +V + T + W+ G + ++ D+ F +EVL + FK ++ SF+R
Sbjct: 82 SFPRKLWTIV-EEDTFKSVSWNDDGDAVII-DKDLFQREVLQRKGAERIFKTDSLTSFIR 139
Query: 74 QLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
QLN+YGF K G + + + + +F R + +LLE ++RK
Sbjct: 140 QLNLYGFCKTRPSNSPG----NKKMMIYCNSNFQRDKPRLLENIQRK 182
>gi|239746964 PREDICTED: similar to heat shock transcription factor
family, X linked 1 [Homo sapiens]
Length = 333
Score = 50.8 bits (120), Expect = 3e-06
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 19 AFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQ-----YFKHSNMASFVR 73
+F KLW +V + T + W+ G + ++ D+ F +EVL + FK ++ SF+R
Sbjct: 82 SFPRKLWTIV-EEDTFKSVSWNDDGDAVII-DKDLFQREVLQRKGAERIFKTDSLTSFIR 139
Query: 74 QLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
QLN+YGF K G + + + + +F R + +LLE ++RK
Sbjct: 140 QLNLYGFCKTRPSNSPG----NKKMMIYCNSNFQRDKPRLLENIQRK 182
>gi|50312655 heat shock transcription factor, Y-linked 1 isoform 1
[Homo sapiens]
Length = 401
Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP-----QYFKHSNMASFVRQ 74
F KLW +V + I W +GT +++++ F KE+L + F+ + SFVRQ
Sbjct: 80 FPRKLWKIV-ESDQFKSISWDENGTCIVINEEL-FKKEILETKAPYRIFQTDAIKSFVRQ 137
Query: 75 LNMYGFRKVVSIEQ-----GGLLRPERDHVE------FQHPSFVRGREQLLERVRRKV 121
LN+YGF K+ Q L E++ + +P+F RG QLL RV+R++
Sbjct: 138 LNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNFKRGYPQLLVRVKRRI 195
>gi|32526913 heat shock transcription factor, Y linked 2 isoform 1
[Homo sapiens]
Length = 401
Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP-----QYFKHSNMASFVRQ 74
F KLW +V + I W +GT +++++ F KE+L + F+ + SFVRQ
Sbjct: 80 FPRKLWKIV-ESDQFKSISWDENGTCIVINEEL-FKKEILETKAPYRIFQTDAIKSFVRQ 137
Query: 75 LNMYGFRKVVSIEQ-----GGLLRPERDHVE------FQHPSFVRGREQLLERVRRKV 121
LN+YGF K+ Q L E++ + +P+F RG QLL RV+R++
Sbjct: 138 LNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNFKRGYPQLLVRVKRRI 195
>gi|169216697 PREDICTED: heat shock transcription factor family, X
linked 2 [Homo sapiens]
Length = 423
Score = 45.8 bits (107), Expect = 8e-05
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKH-----SNMASFVRQ 74
F KLW LV I W SG +++ Q F KE+L + H +++ SF RQ
Sbjct: 99 FPQKLWRLVSSNQFSS-IWWDDSGACRVIN-QKLFEKEILKRDVAHKVFATTSIKSFFRQ 156
Query: 75 LNMYGFRK--------VVSIEQGGLLRPERDHVEFQ-HPSFVRGREQLLERVRRKV 121
LN+YGFRK I L + +EF HP F R LL R++R+V
Sbjct: 157 LNLYGFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPYFQRDSPHLLVRMKRRV 212
>gi|7706603 heat shock transcription factor family, X linked 1 [Homo
sapiens]
Length = 423
Score = 45.8 bits (107), Expect = 8e-05
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKH-----SNMASFVRQ 74
F KLW LV I W SG +++ Q F KE+L + H +++ SF RQ
Sbjct: 99 FPQKLWRLVSSNQFSS-IWWDDSGACRVIN-QKLFEKEILKRDVAHKVFATTSIKSFFRQ 156
Query: 75 LNMYGFRK--------VVSIEQGGLLRPERDHVEFQ-HPSFVRGREQLLERVRRKV 121
LN+YGFRK I L + +EF HP F R LL R++R+V
Sbjct: 157 LNLYGFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPYFQRDSPHLLVRMKRRV 212
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 43.9 bits (102), Expect = 3e-04
Identities = 66/244 (27%), Positives = 87/244 (35%), Gaps = 69/244 (28%)
Query: 185 IGKLIQCLFGPLQAGPSNAG----------GKRKLSLMLDEGSSCPTPAKFNTCPLPGAL 234
+G+L + GP + G + G G ++L L + P P +T P P L
Sbjct: 722 LGRLKEKKKGPERGGETPEGLATSVVHYGAGAKELGAFLQKSPPPPPPTAQSTQPTPHGL 781
Query: 235 LQDPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPL 294
L L GP P L P P LP V++ AP P
Sbjct: 782 L---------------------LEAGGPDLPLVL-------PPPPPQLLPSVLSHAPSPS 813
Query: 295 PVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSP--ESLLPPMLL 352
P A G P A QP P P P PL LE+ RS E P L
Sbjct: 814 P----SASKVGVHLLEPATRDGAPQPPPPPPPPPPPM-PLQLEAHLRSHGLEPAAPSPRL 868
Query: 353 QPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSP-SP 411
+ P+ES++P G + L L ++PL P G+ G+ P S
Sbjct: 869 R-PEESLDPPGAMQEL-----------------LGALEPLPPAPGD-----TGVGPPNSE 905
Query: 412 GKDP 415
GKDP
Sbjct: 906 GKDP 909
Score = 35.0 bits (79), Expect = 0.14
Identities = 42/178 (23%), Positives = 60/178 (33%), Gaps = 14/178 (7%)
Query: 195 PLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQSPSTYSLSQRQI 254
P +G GG + + G CP+P K L L P F R +
Sbjct: 1335 PPPSGAFGLGGALEAAESEGLGLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDL 1394
Query: 255 W---ALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSFSP 311
+ A++ P + T P GP P PPPLP + + +P
Sbjct: 1395 QESISSAISALDDPPLAGPKDTSTP-DGPPLAPAAAVPGPPPLP-----GLPSANSNGTP 1448
Query: 312 EGPRNAQQPEP-----GDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGP 364
E P ++P P P+ P P + SP L+ P PP + P P
Sbjct: 1449 EPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPP 1506
Score = 30.4 bits (67), Expect = 3.5
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 284 PPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGL 336
PP M PPP P A + PE P P P DP E+PD PL L
Sbjct: 1506 PPAMPSPPPPPPPAAAPL------AAPPEEP---AAPSPEDP-ELPDTRPLHL 1548
Score = 30.0 bits (66), Expect = 4.6
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 222 PAKFNTCPLP---GALLQDPYFIQSPSTYSLSQRQIWALALT-GPGAPSSLTSQK----- 272
PA F + P P LQDP F P+ LS + L + P PSSL ++
Sbjct: 154 PASFGSRPFPVPSSLSLQDPPF-SPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGG 212
Query: 273 TLHPLR-GPGFLPPVMAGAPPPLP 295
L P GP PP G P P P
Sbjct: 213 VLGPAGLGPAQTPPYRPGPPDPPP 236
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.5 bits (101), Expect = 4e-04
Identities = 76/286 (26%), Positives = 96/286 (33%), Gaps = 33/286 (11%)
Query: 189 IQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTP--AKFNTCP--LPGALLQDPYFIQSP 244
+Q L P PS A + S P+P + T P P AL P +Q+P
Sbjct: 351 LQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPP--LQAP 408
Query: 245 STYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILE 304
+ S + LA P AP++L P P PPV A PP V
Sbjct: 409 PSPPASP-PLSPLATPSPQAPNALAVHLLQAPFSPPPS-PPVQAPFSPPASPPV------ 460
Query: 305 GKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLE-SGDRSPESLLPPMLLQPPQESVEPA- 362
S S P A P ++P P S +P PP L PP + +P
Sbjct: 461 ---SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPP 517
Query: 363 -GPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAPL 421
P + P LQ L + P L + L +P P P L APL
Sbjct: 518 QAPPALATPPLQA-------LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 570
Query: 422 LLDVQAALGGPAL------GLPGALTIYSTPESRTASYLGPEASPS 461
L + P L PG T S P A GP PS
Sbjct: 571 LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS 616
Score = 36.2 bits (82), Expect = 0.064
Identities = 65/246 (26%), Positives = 79/246 (32%), Gaps = 36/246 (14%)
Query: 221 TPAKFNTCPLPGALLQDPYFIQSPSTYSLSQRQIWALALTGPGAP--SSLTSQKTLHPLR 278
TP + + P G L P SPS SQ T P P SSLT Q L
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP-----TLPATPHSSSLTCQ-----LA 335
Query: 279 GPGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLES 338
P L P APP L + + G Q P P PL
Sbjct: 336 TPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS--PPLSPLATPP 393
Query: 339 GDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGE 398
P LPP+ P + P PL PS Q + L L P P
Sbjct: 394 PQAPPALALPPLQAPPSPPASPPLSPLAT--PSPQAPNALAVHL-----LQAPFSPPPSP 446
Query: 399 PELAVKGLNSP--SPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRTASYLGP 456
P V+ SP SP P+ P +L P L +P P + + P
Sbjct: 447 P---VQAPFSPPASPPVSPSATPP--SQAPPSLAAPPLQVP--------PSPPASPPMSP 493
Query: 457 EASPSP 462
A+P P
Sbjct: 494 SATPPP 499
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.5 bits (101), Expect = 4e-04
Identities = 76/286 (26%), Positives = 96/286 (33%), Gaps = 33/286 (11%)
Query: 189 IQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTP--AKFNTCP--LPGALLQDPYFIQSP 244
+Q L P PS A + S P+P + T P P AL P +Q+P
Sbjct: 312 LQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPP--LQAP 369
Query: 245 STYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILE 304
+ S + LA P AP++L P P PPV A PP V
Sbjct: 370 PSPPASP-PLSPLATPSPQAPNALAVHLLQAPFSPPPS-PPVQAPFSPPASPPV------ 421
Query: 305 GKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLE-SGDRSPESLLPPMLLQPPQESVEPA- 362
S S P A P ++P P S +P PP L PP + +P
Sbjct: 422 ---SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPP 478
Query: 363 -GPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAPL 421
P + P LQ L + P L + L +P P P L APL
Sbjct: 479 QAPPALATPPLQA-------LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 531
Query: 422 LLDVQAALGGPAL------GLPGALTIYSTPESRTASYLGPEASPS 461
L + P L PG T S P A GP PS
Sbjct: 532 LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS 577
Score = 33.9 bits (76), Expect = 0.32
Identities = 52/208 (25%), Positives = 66/208 (31%), Gaps = 44/208 (21%)
Query: 257 LALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRN 316
LA P AP S ++ +L L P PP A P L+ SF P
Sbjct: 295 LATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPT------LQATHSFLPS---- 344
Query: 317 AQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGRE 376
P PL P LPP+ P + P PL PS Q
Sbjct: 345 ------------PPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT--PSPQAPN 390
Query: 377 WTLMDLDMELSLMQPLVPERGEPELAVKGLNSP--SPGKDPTLGAPLLLDVQAALGGPAL 434
+ L L P P P V+ SP SP P+ P +L P L
Sbjct: 391 ALAVHL-----LQAPFSPPPSPP---VQAPFSPPASPPVSPSATPP--SQAPPSLAAPPL 440
Query: 435 GLPGALTIYSTPESRTASYLGPEASPSP 462
+P P + + P A+P P
Sbjct: 441 QVP--------PSPPASPPMSPSATPPP 460
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 42.4 bits (98), Expect = 9e-04
Identities = 72/255 (28%), Positives = 89/255 (34%), Gaps = 41/255 (16%)
Query: 220 PTPAKFNTCPLPGALLQDPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRG 279
PTP P P A P Q T S + Q A T P + + LHP R
Sbjct: 208 PTPG-----PTPSATAVPP---QGSPTASQAPNQ--PQAPTAPVPHTHIQQAPALHPQRP 257
Query: 280 PGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESG 339
P PP P P P +Q + G P P +AQ P G GP L++G
Sbjct: 258 PSPHPP-----PHPSPHPPLQPLTGSAG--QPSAPSHAQPPLHGQ----GPPGPHSLQAG 306
Query: 340 DRSPESLLPPMLLQPPQESVEPAGPLDVLGPS-LQGREWTLMDLDMELSLMQPLVPERGE 398
P PPQ S A LG S T + L S +Q P R +
Sbjct: 307 PLLQHPGPPQPFGLPPQASQGQA----PLGTSPAAAYPHTSLQLPASQSALQSQQPPREQ 362
Query: 399 P----ELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPA-------LGLPGALTIYSTPE 447
P LA+ + P P L AP L GP+ L P AL P
Sbjct: 363 PLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPAL----KPL 418
Query: 448 SRTASYLGPEASPSP 462
S +++ P A P P
Sbjct: 419 SSLSTHHPPSAHPPP 433
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.4 bits (98), Expect = 9e-04
Identities = 72/255 (28%), Positives = 89/255 (34%), Gaps = 41/255 (16%)
Query: 220 PTPAKFNTCPLPGALLQDPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRG 279
PTP P P A P Q T S + Q A T P + + LHP R
Sbjct: 762 PTPG-----PTPSATAVPP---QGSPTASQAPNQ--PQAPTAPVPHTHIQQAPALHPQRP 811
Query: 280 PGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESG 339
P PP P P P +Q + G P P +AQ P G GP L++G
Sbjct: 812 PSPHPP-----PHPSPHPPLQPLTGSAG--QPSAPSHAQPPLHGQ----GPPGPHSLQAG 860
Query: 340 DRSPESLLPPMLLQPPQESVEPAGPLDVLGPS-LQGREWTLMDLDMELSLMQPLVPERGE 398
P PPQ S A LG S T + L S +Q P R +
Sbjct: 861 PLLQHPGPPQPFGLPPQASQGQA----PLGTSPAAAYPHTSLQLPASQSALQSQQPPREQ 916
Query: 399 P----ELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPA-------LGLPGALTIYSTPE 447
P LA+ + P P L AP L GP+ L P AL P
Sbjct: 917 PLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPAL----KPL 972
Query: 448 SRTASYLGPEASPSP 462
S +++ P A P P
Sbjct: 973 SSLSTHHPPSAHPPP 987
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.4 bits (98), Expect = 9e-04
Identities = 72/255 (28%), Positives = 89/255 (34%), Gaps = 41/255 (16%)
Query: 220 PTPAKFNTCPLPGALLQDPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRG 279
PTP P P A P Q T S + Q A T P + + LHP R
Sbjct: 762 PTPG-----PTPSATAVPP---QGSPTASQAPNQ--PQAPTAPVPHTHIQQAPALHPQRP 811
Query: 280 PGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESG 339
P PP P P P +Q + G P P +AQ P G GP L++G
Sbjct: 812 PSPHPP-----PHPSPHPPLQPLTGSAG--QPSAPSHAQPPLHGQ----GPPGPHSLQAG 860
Query: 340 DRSPESLLPPMLLQPPQESVEPAGPLDVLGPS-LQGREWTLMDLDMELSLMQPLVPERGE 398
P PPQ S A LG S T + L S +Q P R +
Sbjct: 861 PLLQHPGPPQPFGLPPQASQGQA----PLGTSPAAAYPHTSLQLPASQSALQSQQPPREQ 916
Query: 399 P----ELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPA-------LGLPGALTIYSTPE 447
P LA+ + P P L AP L GP+ L P AL P
Sbjct: 917 PLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPAL----KPL 972
Query: 448 SRTASYLGPEASPSP 462
S +++ P A P P
Sbjct: 973 SSLSTHHPPSAHPPP 987
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 42.4 bits (98), Expect = 9e-04
Identities = 68/295 (23%), Positives = 111/295 (37%), Gaps = 44/295 (14%)
Query: 84 VSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRPEDLGRLLGE- 142
+++EQ + + E + +E P G E+++++ ++KVP + + P + +
Sbjct: 452 LAMEQEQMGKDESNEIEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQN 511
Query: 143 ---VQALRGV--QESTEARLRELRQQNEILWREVVTLRQSHGQ--QHRVIGKLIQCLFGP 195
+ A V + +L E ++ + +E+ TL+ ++ Q + I +L Q
Sbjct: 512 KVPIPAPNEVLNDRKEDIKLEEKKKTQAEIEQEMATLQYTNPQLLEQLKIERLAQKQVEQ 571
Query: 196 LQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQSPSTYSLSQRQIW 255
+Q PS+ G+ P F P G + Q P Q P SQ+
Sbjct: 572 IQPPPSS-------------GTPLLGPQPF---PGQGPMSQIPQGFQQPHP---SQQMPM 612
Query: 256 ALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPR 315
+A GP P F PP G P + Q +G P+GP
Sbjct: 613 NMAQMGPPGPQG-------------QFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGP- 658
Query: 316 NAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGP 370
Q P G PR GP G++ P L P PQ S P G + GP
Sbjct: 659 --QGPPQGLPRPQDMHGPQGMQR-HPGPHGPLGPQGPPGPQGSSGPQGHMGPQGP 710
Score = 30.8 bits (68), Expect = 2.7
Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 30/141 (21%)
Query: 259 LTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQ 318
+ GP P + H ++G P G P+ + L +G P GPR Q
Sbjct: 740 MQGPPGPRGMQGPPHPHGIQGG----PGSQGIQGPVSQGPLMG-LNPRGMQGPPGPRENQ 794
Query: 319 QPEP------GDPREI----PDRGPLGLESGD-RSPESLL-----PPM--LLQPPQESVE 360
P P P+E+ P G LG + R P+ + PP +L PPQE
Sbjct: 795 GPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRG 854
Query: 361 PAG-------PLDVLGPSLQG 374
P G P LGP QG
Sbjct: 855 PPGSQSQQGPPQGSLGPPPQG 875
Score = 30.4 bits (67), Expect = 3.5
Identities = 40/153 (26%), Positives = 54/153 (35%), Gaps = 25/153 (16%)
Query: 231 PGALL-QDPYFIQSPSTYSLSQRQIWALALTGP-----GAPSSLTSQKTLHPLRGPGFLP 284
PG LL P ++ P Q ++ GP G P S + Q GP P
Sbjct: 816 PGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGP---P 872
Query: 285 PVMAGAPPPLPVAVVQAILEGKGSFSP-EGPRNAQQPEPGDPREIP-----DRGPLGLES 338
P PP P +G +P GP +Q P P ++ P R P E
Sbjct: 873 PQGGMQGPPGP----------QGQQNPARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEG 922
Query: 339 GDRSPESLLPPMLLQPPQESVEPAGPLDVLGPS 371
P L+P + Q Q + P P GP+
Sbjct: 923 QSTGPPPLIPGLGQQGAQGRIPPLNPGQGPGPN 955
>gi|24211017 heat shock transcription factor, Y-linked 1 isoform 2
[Homo sapiens]
Length = 203
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP-----QYFKHSNMASFVRQ 74
F KLW +V + I W +GT +++++ F KE+L + F+ + SFVRQ
Sbjct: 80 FPRKLWKIV-ESDQFKSISWDENGTCIVINEEL-FKKEILETKAPYRIFQTDAIKSFVRQ 137
Query: 75 LNMYGFRKV 83
LN+YGF K+
Sbjct: 138 LNLYGFSKI 146
>gi|50312659 heat shock transcription factor, Y linked 2 isoform 2
[Homo sapiens]
Length = 203
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP-----QYFKHSNMASFVRQ 74
F KLW +V + I W +GT +++++ F KE+L + F+ + SFVRQ
Sbjct: 80 FPRKLWKIV-ESDQFKSISWDENGTCIVINEEL-FKKEILETKAPYRIFQTDAIKSFVRQ 137
Query: 75 LNMYGFRKV 83
LN+YGF K+
Sbjct: 138 LNLYGFSKI 146
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/218 (27%), Positives = 73/218 (33%), Gaps = 36/218 (16%)
Query: 262 PGAPSSLTSQKTLHPLRGPG-------FLPPVMAGAPPPLPVAVV---QAILEGKGSFSP 311
PGAP + + + L PG PP GAP P A + Q +L +G P
Sbjct: 802 PGAPGKIVTSEGSSMLTVPGPPGPPGAMGPPGPPGAPGPAGPAGLPGHQEVLNLQGPPGP 861
Query: 312 EGPRNAQQPE---PGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVL 368
GPR P P PR P G G S S L PP P D
Sbjct: 862 PGPRGPPGPSIPGPPGPRGPPGEGLPGPPGPPGSFLSNSETFLSGPPGPPGPPGPKGDQG 921
Query: 369 GPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAA 428
P +G + E+G P + G +S G P +
Sbjct: 922 PPGPRGHQ-----------------GEQGLPGFSTSGSSSFGLNLQGPPGPPGPQGPKGD 964
Query: 429 LGGPALGLPGALTIYSTP----ESRTASYLGPEASPSP 462
G P G+PGAL I S P S T GP P P
Sbjct: 965 KGDP--GVPGALGIPSGPSEGGSSSTMYVSGPPGPPGP 1000
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 40.0 bits (92), Expect = 0.004
Identities = 66/250 (26%), Positives = 95/250 (38%), Gaps = 37/250 (14%)
Query: 194 GPLQAGPSNAGGKRKLSLMLDEG--SSCPTPAKFNTCPLPGALLQDPYF--IQSPSTYSL 249
GP P N+ K+S +L +G S P + LP PYF + + SL
Sbjct: 761 GPSATKPPNS----KISGLLPQGLPGSIPLALALSNSGLP---TPTPYFPILAGRGSTSL 813
Query: 250 SQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSF 309
L G+ +S T G G PV A + P P ++++ I KG
Sbjct: 814 PVGTPSLLGAVSSGSAASATPDTPTLVASGAGDSAPVAAASVPAPPASIMERISASKGLI 873
Query: 310 SPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQP-PQESVEPAGPLDVL 368
SP R A P D G SG + + PP ++P P ES GP +
Sbjct: 874 SPMMARLAAAAL--KPSATFDPG-----SGQQVTPARFPPAQVKPEPGESTGAPGPHE-- 924
Query: 369 GPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGK----DPTLGAPLLLD 424
D ++L++ +P G A L S K +P LG+ LL+
Sbjct: 925 ---------ASQDRSLDLTVKEPSNESNGHAVPANSSLLSSLMNKMSQGNPGLGS--LLN 973
Query: 425 VQA-ALGGPA 433
++A A G PA
Sbjct: 974 IKAEAEGSPA 983
>gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]
Length = 1166
Score = 40.0 bits (92), Expect = 0.004
Identities = 66/250 (26%), Positives = 95/250 (38%), Gaps = 37/250 (14%)
Query: 194 GPLQAGPSNAGGKRKLSLMLDEG--SSCPTPAKFNTCPLPGALLQDPYF--IQSPSTYSL 249
GP P N+ K+S +L +G S P + LP PYF + + SL
Sbjct: 761 GPSATKPPNS----KISGLLPQGLPGSIPLALALSNSGLP---TPTPYFPILAGRGSTSL 813
Query: 250 SQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSF 309
L G+ +S T G G PV A + P P ++++ I KG
Sbjct: 814 PVGTPSLLGAVSSGSAASATPDTPTLVASGAGDSAPVAAASVPAPPASIMERISASKGLI 873
Query: 310 SPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQP-PQESVEPAGPLDVL 368
SP R A P D G SG + + PP ++P P ES GP +
Sbjct: 874 SPMMARLAAAAL--KPSATFDPG-----SGQQVTPARFPPAQVKPEPGESTGAPGPHE-- 924
Query: 369 GPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGK----DPTLGAPLLLD 424
D ++L++ +P G A L S K +P LG+ LL+
Sbjct: 925 ---------ASQDRSLDLTVKEPSNESNGHAVPANSSLLSSLMNKMSQGNPGLGS--LLN 973
Query: 425 VQA-ALGGPA 433
++A A G PA
Sbjct: 974 IKAEAEGSPA 983
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 39.3 bits (90), Expect = 0.008
Identities = 55/186 (29%), Positives = 71/186 (38%), Gaps = 30/186 (16%)
Query: 261 GPGAPSSLTSQ-KTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQ 319
GPG P + Q +T PG P A APP + G SP+ P+ +
Sbjct: 268 GPGGPQPGSRQAETARATSVPG---PAQAAAPPEV------------GRVSPQPPQPTK- 311
Query: 320 PEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTL 379
P +PR P G +S P L + QE + G L LG SL + TL
Sbjct: 312 PSTAEPR--PPAGEAPAKSATAVPAGL---GATEQTQEGL--TGKLFGLGASLLTQASTL 364
Query: 380 MDLDMELSLMQPLVPERGEPELAVKGLN---SPSP-GKDPTLG-APLLLDVQAALGGPAL 434
M + E P +G P++ + P P G P G AP A GP
Sbjct: 365 MSVQPEADTQGQPAPSKGTPKIVFNDASKEAGPKPLGSGPGPGPAPGAKTEPGARMGPGS 424
Query: 435 GLPGAL 440
G PGAL
Sbjct: 425 G-PGAL 429
Score = 30.0 bits (66), Expect = 4.6
Identities = 35/132 (26%), Positives = 47/132 (35%), Gaps = 6/132 (4%)
Query: 221 TPAKFNTCPLPGALLQDPYFIQSPS------TYSLSQRQIWALALTGPGAPSSLTSQKTL 274
TPA+ + LPGA +Q T L + AL LTG S L +
Sbjct: 1845 TPAELRSHALPGARKPHTVVVQMGEGTAGTVTTLLPEEPAGALDLTGMRPESQLACCDMV 1904
Query: 275 HPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPL 334
+ L AP ++ A G+ S GPR+ + PEP R GP
Sbjct: 1905 YKLPFGSSCTGTFHPAPSVPEKSMADAAPPGQSSSPFYGPRDPEPPEPPTYRAQGVVGPG 1964
Query: 335 GLESGDRSPESL 346
E P+ L
Sbjct: 1965 PHEEQRPYPQGL 1976
>gi|153251840 zinc finger protein 839 [Homo sapiens]
Length = 927
Score = 39.3 bits (90), Expect = 0.008
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 22/122 (18%)
Query: 238 PYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVA 297
P + QS L+Q Q+ A G A + Q T LR PGF P+ +G
Sbjct: 704 PVYAQSGEPRRLTQAQV--AAFPGENALEHSSDQDTWDSLRSPGFCSPLSSGG------- 754
Query: 298 VVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQE 357
G S P GP +A E G ++ D L SP S+LP + PP E
Sbjct: 755 -------GAESLPPGGPGHA---EAGHLGKVCD---FHLNHQQPSPTSVLPTEVAAPPLE 801
Query: 358 SV 359
+
Sbjct: 802 KI 803
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 39.3 bits (90), Expect = 0.008
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 20/145 (13%)
Query: 149 VQESTEARLRELRQQNEILWREVVTLRQSHGQQHRVIGKLIQCLFGPLQAGPSNAGGKRK 208
++E+ E LR ++N +++E+ L + Q+ + + + NA
Sbjct: 85 LRETFERILRLYEKENPDIYKELRKLEVEYEQKRAQLSQYFDAV--------KNAQHVEV 136
Query: 209 LSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQSPSTYSLSQRQIWALALTGPGAPSSL 268
S+ L + P+ PLPGA Q P ++ S Y R + L L G G P
Sbjct: 137 ESIPLPDMPHAPSNILIQDIPLPGA--QPPSILKKTSAYGPPTRAVSILPLLGHGVP--- 191
Query: 269 TSQKTLHPLRGPGFLPPVMAGAPPP 293
L P R P PP G PPP
Sbjct: 192 ----RLPPGRKPPGPPP---GPPPP 209
Score = 36.2 bits (82), Expect = 0.064
Identities = 35/113 (30%), Positives = 44/113 (38%), Gaps = 11/113 (9%)
Query: 259 LTGPGAPSSLTSQKTLHPLRGPGFL-PPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNA 317
L PG P+ L P P FL PP M G PLP + G+ P GP
Sbjct: 421 LRPPGPPTGLPPGP---PPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPG 477
Query: 318 QQPEP---GDPREIPDRGPLGLESGDRSPESLLPPML--LQPPQESVEPAGPL 365
P P G P +P P G+ P + PP++ L P + P PL
Sbjct: 478 LPPGPPPRGPPPRLPPPAPPGIP--PPRPGMMRPPLVPPLGPAPPGLFPPAPL 528
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.5 bits (88), Expect = 0.013
Identities = 57/219 (26%), Positives = 70/219 (31%), Gaps = 21/219 (9%)
Query: 262 PGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGS--FSPEGPRNAQQ 319
P P P P PP + APP L +Q S SP Q
Sbjct: 669 PSPPVQAPFSPPASPPVSPSATPP--SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 726
Query: 320 PEP--GDPREIPDRGPLGLE-SGDRSPESLLPPMLLQPPQE------SVEPAGPLDVLGP 370
P P P ++P P S +P +PP+L PP + + P PL P
Sbjct: 727 PPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPP 786
Query: 371 SLQGREWT--LMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAA 428
T L L + P L + L +P P P L APLL +
Sbjct: 787 QAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP 846
Query: 429 LGGPAL------GLPGALTIYSTPESRTASYLGPEASPS 461
P L PG T S P A GP PS
Sbjct: 847 PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS 885
Score = 32.7 bits (73), Expect = 0.71
Identities = 58/222 (26%), Positives = 75/222 (33%), Gaps = 48/222 (21%)
Query: 265 PSSLTSQKTLHPLRG-PGFLPPVM--AGAP--------PPLPVAV-VQAILEGKGSFSPE 312
P+SLT+ PL P PP + A AP PP P +QA + PE
Sbjct: 527 PASLTTP----PLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPE 582
Query: 313 GPRNAQQPEPGDPREI----------PDRGPLGLESGDRSPESLLPPMLLQPPQESVEPA 362
P + P P P + P PL P LPP+ P + P
Sbjct: 583 TPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPL 642
Query: 363 GPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSP--SPGKDPTLGAP 420
PL PS Q + L L P P P V+ SP SP P+ P
Sbjct: 643 SPLAT--PSPQAPNALAVHL-----LQAPFSPPPSPP---VQAPFSPPASPPVSPSATPP 692
Query: 421 LLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP 462
+L P L +P P + + P A+P P
Sbjct: 693 --SQAPPSLAAPPLQVP--------PSPPASPPMSPSATPPP 724
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 38.5 bits (88), Expect = 0.013
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 13/112 (11%)
Query: 262 PGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPE 321
P P+S+ S K + P P LPP+ PPPLP+ K P P Q
Sbjct: 236 PLPPASVLSDKAVKPQLAPLHLPPI----PPPLPLLPPCGYPGLKA--EPASPAQDAQEP 289
Query: 322 PGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQ 373
P P +P SP + LP L S E PL PS Q
Sbjct: 290 PAPPPPLPPYASC-------SPRASLPAPPLPGVNSSSETPPPLPPKSPSFQ 334
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 38.1 bits (87), Expect = 0.017
Identities = 59/234 (25%), Positives = 79/234 (33%), Gaps = 23/234 (9%)
Query: 134 EDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQQHRVIGKLIQCLF 193
+ L L GE AL ++ ++L + L EV L + + + L
Sbjct: 502 QKLQDLQGEKDALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAI 561
Query: 194 GPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQSPSTYSLSQRQ 253
+ PS A L D G+ P P P PG P P
Sbjct: 562 TVPPSVPSRAPVPPAPPLPGDSGTIIPPP------PAPGDSTTPP---PPPPPPPPPPPL 612
Query: 254 IWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAV---VQAILEGKGSFS 310
+ ++ P + T+ PL G +PP PPPLP V + L G G+
Sbjct: 613 PGGVCISSPPSLPGGTAISPPPPLSGDATIPP-----PPPLPEGVGIPSPSSLPG-GTAI 666
Query: 311 PEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGP 364
P P P PG R P PL +G P LP PP P GP
Sbjct: 667 PPPP-----PLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGP 715
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,964,946
Number of Sequences: 37866
Number of extensions: 1510177
Number of successful extensions: 5732
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 353
Number of HSP's that attempted gapping in prelim test: 5206
Number of HSP's gapped (non-prelim): 825
length of query: 462
length of database: 18,247,518
effective HSP length: 106
effective length of query: 356
effective length of database: 14,233,722
effective search space: 5067205032
effective search space used: 5067205032
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.