Guide to the Human Genome
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Name: HSF5 Sequence: fasta or formatted (596aa) NCBI GI: 122937277
Description:

heat shock transcription factor family member 5

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         38           2
 C cysteine            2.0         12           2
 D aspartate           2.5         15           1
 E glutamate           5.9         35           3
 F phenylalanine       3.7         22           1
 G glycine             6.0         36           5
 H histidine           4.0         24           2
 I isoleucine          2.7         16           1
 K lysine              3.5         21           1
 L leucine             8.1         48           2
 M methionine          1.5          9           1
 N asparagine          4.7         28           2
 P proline            11.1         66           4
 Q glutamine           6.7         40           2
 R arginine            4.4         26           2
 S serine             10.9         65           3
 T threonine           6.2         37           2
 V valine              6.2         37           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.9         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock transcription factor family member 5 [Ho... 
LOC100133153          0.047   PREDICTED: similar to heat shock transcription fact...
LOC100133153          0.047   PREDICTED: similar to heat shock transcription fact...
HSFY1                 0.046   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.046   heat shock transcription factor, Y linked 2 isoform ...
HSFX2                 0.044   PREDICTED: heat shock transcription factor family, ...
HSFX1                 0.044   heat shock transcription factor family, X linked 1 [H...
HSFY1                 0.036   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.036   heat shock transcription factor, Y linked 2 isoform ...
HSF2                  0.035   heat shock transcription factor 2 isoform b 
HSF2                  0.035   heat shock transcription factor 2 isoform a 
HSF1                  0.029   heat shock transcription factor 1 
HSF4                  0.029   heat shock transcription factor 4 isoform b 
HSF4                  0.029   heat shock transcription factor 4 isoform a 
NRXN1                 0.011   neurexin 1 isoform beta precursor 
MLL3                  0.010   myeloid/lymphoid or mixed-lineage leukemia 3 
C2orf71               0.010   hypothetical protein LOC388939 
POU3F3                0.010   POU class 3 homeobox 3 
MUC17                 0.010   mucin 17 
CTNND2                0.009   catenin (cadherin-associated protein), delta 2 (neur...
PCLO                  0.009   piccolo isoform 1 
RFX1                  0.009   regulatory factor X1 
MAGEC1                0.008   melanoma antigen family C, 1 
SRRM1                 0.008   serine/arginine repetitive matrix 1 
MUC16                 0.008   mucin 16 
SEMA6B                0.008   semaphorin 6B precursor 
BRD4                  0.008   bromodomain-containing protein 4 isoform long 
USP31                 0.007   ubiquitin specific peptidase 31 
MUC6                  0.007   mucin 6, gastric 
EYA2                  0.007   eyes absent 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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