Guide to the Human Genome
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Name: HSF2 Sequence: fasta or formatted (536aa) NCBI GI: 4758568
Description:

heat shock transcription factor 2 isoform a

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt prot [518aa] heat shock transcription factor 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         22           1
 C cysteine            0.6          3           1
 D aspartate           7.5         40           2
 E glutamate           9.0         48           2
 F phenylalanine       3.2         17           1
 G glycine             3.0         16           1
 H histidine           1.9         10           3
 I isoleucine          5.8         31           3
 K lysine              6.7         36           2
 L leucine            10.3         55           3
 M methionine          1.7          9           2
 N asparagine          6.0         32           2
 P proline             5.6         30           1
 Q glutamine           6.3         34           4
 R arginine            3.4         18           1
 S serine             11.2         60           3
 T threonine           4.7         25           2
 V valine              6.9         37           2
 W tryptophan          0.6          3           1
 Y tyrosine            1.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock transcription factor 2 isoform a 
HSF2                  0.953   heat shock transcription factor 2 isoform b 
HSF1                  0.263   heat shock transcription factor 1 
HSF4                  0.164   heat shock transcription factor 4 isoform b 
HSF4                  0.164   heat shock transcription factor 4 isoform a 
HSF5                  0.041   heat shock transcription factor family member 5 [Ho...
HSFY1                 0.033   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.033   heat shock transcription factor, Y linked 2 isoform ...
LOC100133153          0.033   PREDICTED: similar to heat shock transcription fact...
LOC100133153          0.033   PREDICTED: similar to heat shock transcription fact...
HSFX2                 0.025   PREDICTED: heat shock transcription factor family, ...
HSFY1                 0.025   heat shock transcription factor, Y-linked 1 isoform ...
HSFX1                 0.025   heat shock transcription factor family, X linked 1 [H...
HSFY2                 0.025   heat shock transcription factor, Y linked 2 isoform ...
PTRF                  0.017   polymerase I and transcript release factor 
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
MYH3                  0.017   myosin, heavy chain 3, skeletal muscle, embryonic [H...
FKBP15                0.016   FK506 binding protein 15, 133kDa 
CCDC144A              0.016   coiled-coil domain containing 144A 
ANKRD26               0.015   ankyrin repeat domain 26 
ZFP106                0.015   zinc finger protein 106 homolog 
RTN3                  0.014   reticulon 3 isoform b 
LOC100132057          0.014   PREDICTED: similar to Neuroblastoma breakpoint fami...
ACRC                  0.014   ACRC protein 
LOC100132057          0.013   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100130000          0.013   PREDICTED: Neuroblastoma breakpoint family member 6...
RPGRIP1               0.013   retinitis pigmentosa GTPase regulator interacting p...
BOD1L                 0.013   biorientation of chromosomes in cell division 1-like...
MYH2                  0.013   myosin, heavy chain 2, skeletal muscle, adult [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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