Guide to the Human Genome
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Name: HSF4 Sequence: fasta or formatted (462aa) NCBI GI: 100913211
Description:

heat shock transcription factor 4 isoform a

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt prot [492aa] heat shock transcription factor 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         31           2
 C cysteine            0.6          3           1
 D aspartate           3.7         17           2
 E glutamate           6.7         31           1
 F phenylalanine       2.8         13           1
 G glycine            10.0         46           2
 H histidine           1.5          7           1
 I isoleucine          2.2         10           1
 K lysine              2.8         13           1
 L leucine            13.9         64           3
 M methionine          1.9          9           1
 N asparagine          1.5          7           1
 P proline            12.8         59           3
 Q glutamine           6.3         29           2
 R arginine            6.9         32           2
 S serine              8.2         38           2
 T threonine           3.5         16           1
 V valine              5.4         25           2
 W tryptophan          1.3          6           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock transcription factor 4 isoform a 
HSF4                  0.877   heat shock transcription factor 4 isoform b 
HSF1                  0.258   heat shock transcription factor 1 
HSF2                  0.184   heat shock transcription factor 2 isoform b 
HSF2                  0.184   heat shock transcription factor 2 isoform a 
HSF5                  0.038   heat shock transcription factor family member 5 [Ho...
LOC100133153          0.028   PREDICTED: similar to heat shock transcription fact...
LOC100133153          0.028   PREDICTED: similar to heat shock transcription fact...
HSFY1                 0.027   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.027   heat shock transcription factor, Y linked 2 isoform ...
HSFX2                 0.023   PREDICTED: heat shock transcription factor family, ...
HSFX1                 0.023   heat shock transcription factor family, X linked 1 [H...
PRR12                 0.021   proline rich 12 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.021   PREDICTED: hypothetical protein LOC80164 
RERE                  0.019   atrophin-1 like protein isoform b 
RERE                  0.019   atrophin-1 like protein isoform a 
RERE                  0.019   atrophin-1 like protein isoform a 
WDR33                 0.019   WD repeat domain 33 isoform 1 
HSFY1                 0.019   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.019   heat shock transcription factor, Y linked 2 isoform ...
COL17A1               0.018   alpha 1 type XVII collagen 
CASZ1                 0.016   castor homolog 1, zinc finger isoform a 
CASZ1                 0.016   castor homolog 1, zinc finger isoform b 
BSN                   0.015   bassoon protein 
ZNF839                0.015   zinc finger protein 839 
WBP11                 0.015   WW domain binding protein 11 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
WIPF3                 0.015   WAS/WASL interacting protein family, member 3 [Homo...
DIAPH1                0.014   diaphanous 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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