Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HSFX1 Sequence: fasta or formatted (423aa) NCBI GI: 7706603
Description:

heat shock transcription factor family, X linked 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         40           2
 C cysteine            1.7          7           1
 D aspartate           5.2         22           2
 E glutamate           5.0         21           2
 F phenylalanine       4.3         18           2
 G glycine             5.0         21           1
 H histidine           4.0         17           3
 I isoleucine          1.9          8           1
 K lysine              3.1         13           1
 L leucine             7.8         33           2
 M methionine          2.4         10           1
 N asparagine          2.8         12           1
 P proline            11.6         49           2
 Q glutamine           5.7         24           2
 R arginine            6.4         27           2
 S serine              9.0         38           2
 T threonine           5.4         23           2
 V valine              5.9         25           2
 W tryptophan          1.4          6           2
 Y tyrosine            2.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock transcription factor family, X linked 1 [H... 
HSFX2                 1.000   PREDICTED: heat shock transcription factor family, ...
HSFY1                 0.151   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.151   heat shock transcription factor, Y linked 2 isoform ...
HSFY1                 0.103   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.103   heat shock transcription factor, Y linked 2 isoform ...
LOC100133153          0.088   PREDICTED: similar to heat shock transcription fact...
LOC100133153          0.088   PREDICTED: similar to heat shock transcription fact...
HSF5                  0.062   heat shock transcription factor family member 5 [Ho...
HSF2                  0.030   heat shock transcription factor 2 isoform b 
HSF2                  0.030   heat shock transcription factor 2 isoform a 
HSF1                  0.028   heat shock transcription factor 1 
SRCAP                 0.025   Snf2-related CBP activator protein 
MAPK7                 0.025   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.025   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.025   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.025   mitogen-activated protein kinase 7 isoform 2 
HSF4                  0.025   heat shock transcription factor 4 isoform b 
HSF4                  0.025   heat shock transcription factor 4 isoform a 
FLJ22184              0.023   PREDICTED: hypothetical protein LOC80164 
MAPK1IP1L             0.019   MAPK-interacting and spindle-stabilizing protein [Ho...
SON                   0.019   SON DNA-binding protein isoform F 
SON                   0.019   SON DNA-binding protein isoform B 
MUC4                  0.018   mucin 4 isoform a 
SETD1B                0.018   SET domain containing 1B 
MUC7                  0.018   mucin 7, secreted precursor 
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
MUC7                  0.018   mucin 7, secreted precursor 
MUC7                  0.018   mucin 7, secreted precursor 
TCERG1                0.016   transcription elongation regulator 1 isoform 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press