Guide to the Human Genome
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Name: LOC100133153 Sequence: fasta or formatted (354aa) NCBI GI: 239752444
Description:

PREDICTED: similar to heat shock transcription factor family, X linked 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt prot [333aa] PREDICTED: similar to heat shock transcription factor family, X l...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         18           1
 C cysteine            1.7          6           1
 D aspartate           5.9         21           2
 E glutamate           6.5         23           3
 F phenylalanine       3.1         11           1
 G glycine             6.5         23           2
 H histidine           1.1          4           1
 I isoleucine          3.4         12           2
 K lysine              5.1         18           2
 L leucine             6.5         23           2
 M methionine          2.5          9           2
 N asparagine          7.1         25           1
 P proline             6.8         24           2
 Q glutamine           5.4         19           2
 R arginine            7.1         25           2
 S serine             11.9         42           2
 T threonine           5.6         20           2
 V valine              4.5         16           2
 W tryptophan          1.4          5           1
 X unknown             0.3          1           1
 Y tyrosine            2.5          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to heat shock transcription fact... 
LOC100133153          0.940   PREDICTED: similar to heat shock transcription fact...
HSFY1                 0.125   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.125   heat shock transcription factor, Y linked 2 isoform ...
HSFX2                 0.107   PREDICTED: heat shock transcription factor family, ...
HSFX1                 0.107   heat shock transcription factor family, X linked 1 [H...
HSFY1                 0.106   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.106   heat shock transcription factor, Y linked 2 isoform ...
HSF5                  0.082   heat shock transcription factor family member 5 [Ho...
HSF2                  0.049   heat shock transcription factor 2 isoform b 
HSF2                  0.049   heat shock transcription factor 2 isoform a 
HSF1                  0.044   heat shock transcription factor 1 
HSF4                  0.037   heat shock transcription factor 4 isoform b 
HSF4                  0.037   heat shock transcription factor 4 isoform a 
DLX1                  0.020   distal-less homeobox 1 isoform 1 
ADD1                  0.014   adducin 1 (alpha) isoform b 
ADD1                  0.014   adducin 1 (alpha) isoform a 
ACRC                  0.014   ACRC protein 
SLC16A2               0.010   solute carrier family 16, member 2 
ANO8                  0.010   anoctamin 8 
NAV2                  0.010   neuron navigator 2 isoform 3 
NAV2                  0.010   neuron navigator 2 isoform 1 
NAV2                  0.010   neuron navigator 2 isoform 2 
TAOK2                 0.010   TAO kinase 2 isoform 1 
TAOK2                 0.010   TAO kinase 2 isoform 2 
LOC100287488          0.009   PREDICTED: hypothetical protein XP_002343589 
MLL2                  0.009   myeloid/lymphoid or mixed-lineage leukemia 2 
RASGRP2               0.009   RAS guanyl releasing protein 2 
RASGRP2               0.009   RAS guanyl releasing protein 2 
RASGRP2               0.009   RAS guanyl releasing protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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