Guide to the Human Genome
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Name: HSFY2 Sequence: fasta or formatted (401aa) NCBI GI: 32526913
Description:

heat shock transcription factor, Y linked 2 isoform 1

Referenced in:

Heat-Shock Proteins and Chaperonins
Y-linked Genes

Other entries for this name:
alt prot [203aa] heat shock transcription factor, Y linked 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         27           2
 C cysteine            0.7          3           1
 D aspartate           3.7         15           3
 E glutamate           6.5         26           2
 F phenylalanine       5.2         21           1
 G glycine             3.2         13           1
 H histidine           3.2         13           1
 I isoleucine          5.5         22           2
 K lysine              5.0         20           2
 L leucine             8.5         34           2
 M methionine          2.0          8           1
 N asparagine          6.0         24           1
 P proline             7.2         29           3
 Q glutamine           4.7         19           2
 R arginine            4.7         19           2
 S serine             12.2         49           2
 T threonine           5.7         23           4
 V valine              5.0         20           1
 W tryptophan          0.7          3           1
 Y tyrosine            3.2         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock transcription factor, Y linked 2 isoform ... 
HSFY1                 1.000   heat shock transcription factor, Y-linked 1 isoform ...
HSFY1                 0.410   heat shock transcription factor, Y-linked 1 isoform ...
HSFY2                 0.410   heat shock transcription factor, Y linked 2 isoform ...
HSFX2                 0.165   PREDICTED: heat shock transcription factor family, ...
HSFX1                 0.165   heat shock transcription factor family, X linked 1 [H...
LOC100133153          0.112   PREDICTED: similar to heat shock transcription fact...
LOC100133153          0.112   PREDICTED: similar to heat shock transcription fact...
HSF5                  0.071   heat shock transcription factor family member 5 [Ho...
HSF2                  0.044   heat shock transcription factor 2 isoform b 
HSF2                  0.044   heat shock transcription factor 2 isoform a 
HSF1                  0.038   heat shock transcription factor 1 
HSF4                  0.032   heat shock transcription factor 4 isoform b 
HSF4                  0.032   heat shock transcription factor 4 isoform a 
PLEKHG3               0.018   pleckstrin homology domain containing, family G, mem...
CIC                   0.009   capicua homolog 
TNRC6A                0.009   trinucleotide repeat containing 6A 
HGS                   0.008   hepatocyte growth factor-regulated tyrosine kinase su...
LOC100293248          0.006   PREDICTED: hypothetical protein 
LOC100290456          0.006   PREDICTED: hypothetical protein XP_002346945 
LOC100289123          0.006   PREDICTED: hypothetical protein XP_002342782 
LOC100289123          0.006   PREDICTED: hypothetical protein 
SEMA4G                0.006   semaphorin 4G 
WNK1                  0.006   WNK lysine deficient protein kinase 1 
ZMYND11               0.006   zinc finger, MYND domain containing 11 isoform a [H...
ZMYND11               0.006   zinc finger, MYND domain containing 11 isoform b [H...
ZMYND11               0.006   zinc finger, MYND domain containing 11 isoform a [H...
C11orf30              0.006   EMSY protein 
FBXL18                0.006   F-box and leucine-rich repeat protein 18 
C11orf24              0.006   hypothetical protein LOC53838 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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