HCRT 29944

Name: HCRT	Sequence: fasta or formatted (131aa)		NCBI GI: 4557635
Description: orexin precursor		Referenced in: Hypothalamus Peptide and Protein G-coupled Signals
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.3 20 3 C cysteine 4.6 6 2 D aspartate 0.8 1 1 E glutamate 1.5 2 1 F phenylalanine 0.0 0 0 G glycine 12.2 16 2 H histidine 2.3 3 1 I isoleucine 2.3 3 1 K lysine 2.3 3 1 L leucine 17.6 23 8 M methionine 1.5 2 1 N asparagine 2.3 3 1 P proline 9.2 12 2 Q glutamine 4.6 6 1 R arginine 8.4 11 2 S serine 7.6 10 2 T threonine 3.8 5 1 V valine 2.3 3 1 W tryptophan 0.8 1 1 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 orexin precursor LOC100131542 0.025 PREDICTED: hypothetical protein LOC100131542 0.025 PREDICTED: hypothetical protein LOC100131542 0.025 PREDICTED: hypothetical protein COL1A2 0.017 alpha 2 type I collagen SCUBE2 0.017 CEGP1 protein NPTXR 0.017 neuronal pentraxin receptor PTGS1 0.017 prostaglandin-endoperoxide synthase 1 isoform 2 prec... PTGS1 0.017 prostaglandin-endoperoxide synthase 1 isoform 1 prec... LOC729549 0.017 PREDICTED: similar to hCG1793014 LOC729549 0.017 PREDICTED: similar to UNCoordinated family member (... ASTN2 0.017 astrotactin 2 isoform c ASTN2 0.017 astrotactin 2 isoform b ASTN2 0.017 astrotactin 2 isoform a LOC100127944 0.017 PREDICTED: hypothetical protein LOC100127944 0.017 PREDICTED: hypothetical protein LOC100127944 0.017 PREDICTED: hypothetical protein IRF2BP1 0.017 interferon regulatory factor 2 binding protein 1 [Ho... C2orf55 0.017 hypothetical protein LOC343990 LOC100292591 0.012 PREDICTED: hypothetical protein LOC100129036 0.012 PREDICTED: hypothetical protein LOC146429 0.012 PREDICTED: hypothetical protein LOC146429 isoform 6... LOC100129036 0.012 PREDICTED: hypothetical protein LOC100129036 0.012 PREDICTED: hypothetical protein STAB1 0.012 stabilin 1 precursor FLJ37078 0.012 hypothetical protein LOC222183 PRB1 0.012 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB1 0.012 proline-rich protein BstNI subfamily 1 isoform 3 pre... PRB1 0.012 proline-rich protein BstNI subfamily 1 isoform 2 pre... LOC441869 0.012 hypothetical protein LOC441869 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.