SYCE1 9923

Name: SYCE1	Sequence: fasta or formatted (282aa)		NCBI GI: 18640754
Description: synaptonemal complex central element protein 1 isoform 1		Referenced in: Spindle, M phase, and Meiosis
Other entries for this name: alt prot [318aa] synaptonemal complex central element protein 1 isoform 3 alt prot [351aa] synaptonemal complex central element protein 1 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 23 4 C cysteine 2.5 7 1 D aspartate 3.2 9 1 E glutamate 14.2 40 3 F phenylalanine 1.4 4 1 G glycine 3.9 11 1 H histidine 3.9 11 1 I isoleucine 2.8 8 1 K lysine 9.9 28 3 L leucine 13.1 37 2 M methionine 2.1 6 1 N asparagine 1.8 5 1 P proline 2.8 8 1 Q glutamine 11.7 33 5 R arginine 6.0 17 1 S serine 4.3 12 2 T threonine 2.8 8 1 V valine 4.3 12 1 W tryptophan 1.1 3 2 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptonemal complex central element protein 1 isofo... SYCE1 1.000 synaptonemal complex central element protein 1 isof... SYCE1 0.950 synaptonemal complex central element protein 1 isof... LOC100130958 0.299 hypothetical protein LOC100130958 LOC653125 0.067 PREDICTED: similar to Golgin subfamily A member 8-l... PLEC1 0.067 plectin 1 isoform 11 PLEC1 0.067 plectin 1 isoform 10 PLEC1 0.067 plectin 1 isoform 8 PLEC1 0.067 plectin 1 isoform 7 PLEC1 0.067 plectin 1 isoform 6 PLEC1 0.067 plectin 1 isoform 3 PLEC1 0.067 plectin 1 isoform 2 PLEC1 0.067 plectin 1 isoform 1 LOC728498 0.065 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.065 PREDICTED: Golgin subfamily A member 8-like protein... LOC653125 0.064 PREDICTED: similar to Golgin subfamily A member 8-l... LOC645202 0.064 PREDICTED: hypothetical protein LOC645202 LOC653720 0.064 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728498 0.062 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.062 PREDICTED: Golgin subfamily A member 8-like protein... LOC727832 0.060 golgi autoantigen, golgin subfamily a-like LOC100133758 0.060 PREDICTED: hypothetical protein, partial LOC653073 0.060 PREDICTED: Golgin subfamily A member 8-like protein... LOC653061 0.060 PREDICTED: similar to Golgin subfamily A member 8-l... MYO18A 0.060 myosin 18A isoform b MYO18A 0.060 myosin 18A isoform a NUMA1 0.058 nuclear mitotic apparatus protein 1 LOC653061 0.056 PREDICTED: similar to Golgin subfamily A member 8-l... PPFIA2 0.056 PTPRF interacting protein alpha 2 LOC653061 0.056 PREDICTED: similar to Golgin subfamily A member 8-l... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.