LOC100130958 10857

Name: LOC100130958	Sequence: fasta or formatted (242aa)		NCBI GI: 194018732
Description: hypothetical protein LOC100130958		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 23 2 C cysteine 0.4 1 1 D aspartate 4.5 11 1 E glutamate 17.4 42 2 F phenylalanine 0.8 2 1 G glycine 5.8 14 1 H histidine 2.9 7 1 I isoleucine 2.9 7 1 K lysine 7.0 17 3 L leucine 14.0 34 2 M methionine 2.5 6 1 N asparagine 1.7 4 1 P proline 5.0 12 2 Q glutamine 5.8 14 2 R arginine 7.9 19 2 S serine 5.0 12 2 T threonine 1.2 3 1 V valine 5.0 12 1 W tryptophan 0.8 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC100130958 SYCE1 0.385 synaptonemal complex central element protein 1 isof... SYCE1 0.385 synaptonemal complex central element protein 1 isof... SYCE1 0.358 synaptonemal complex central element protein 1 isofo... CDC42BPA 0.067 CDC42-binding protein kinase alpha isoform B EEA1 0.056 early endosome antigen 1, 162kD MYO18A 0.056 myosin 18A isoform b MYO18A 0.056 myosin 18A isoform a CEP250 0.049 centrosomal protein 2 MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH10 0.049 myosin, heavy polypeptide 10, non-muscle ODF2L 0.047 outer dense fiber of sperm tails 2-like isoform b [H... ODF2L 0.047 outer dense fiber of sperm tails 2-like isoform a [H... MYH9 0.047 myosin, heavy polypeptide 9, non-muscle GRIPAP1 0.047 GRIP1 associated protein 1 isoform 2 CEP110 0.047 centrosomal protein 110kDa TCHH 0.045 trichohyalin MYH6 0.045 myosin heavy chain 6 GRIPAP1 0.045 GRIP1 associated protein 1 isoform 1 WDR87 0.045 NYD-SP11 protein PPFIA1 0.045 PTPRF interacting protein alpha 1 isoform a PPFIA1 0.045 PTPRF interacting protein alpha 1 isoform b CCDC64B 0.045 coiled-coil domain containing 64B ODF2 0.045 outer dense fiber of sperm tails 2 isoform 1 MYH7 0.043 myosin, heavy chain 7, cardiac muscle, beta PLEC1 0.043 plectin 1 isoform 11 PLEC1 0.043 plectin 1 isoform 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.