SYCE1 13868

Name: SYCE1	Sequence: fasta or formatted (318aa)		NCBI GI: 219555716
Description: synaptonemal complex central element protein 1 isoform 3		Referenced in: Spindle, M phase, and Meiosis
Other entries for this name: alt prot [282aa] synaptonemal complex central element protein 1 isoform 1 alt prot [351aa] synaptonemal complex central element protein 1 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 29 4 C cysteine 2.2 7 1 D aspartate 3.8 12 1 E glutamate 13.5 43 3 F phenylalanine 1.3 4 1 G glycine 4.7 15 2 H histidine 3.5 11 1 I isoleucine 2.8 9 1 K lysine 9.7 31 3 L leucine 12.3 39 2 M methionine 2.2 7 1 N asparagine 1.6 5 1 P proline 2.8 9 1 Q glutamine 11.0 35 5 R arginine 6.0 19 1 S serine 5.0 16 2 T threonine 3.5 11 1 V valine 4.1 13 1 W tryptophan 0.9 3 2 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptonemal complex central element protein 1 isof... SYCE1 0.957 synaptonemal complex central element protein 1 isof... SYCE1 0.889 synaptonemal complex central element protein 1 isofo... LOC100130958 0.286 hypothetical protein LOC100130958 NUMA1 0.066 nuclear mitotic apparatus protein 1 LOC727832 0.063 golgi autoantigen, golgin subfamily a-like LOC653073 0.061 PREDICTED: Golgin subfamily A member 8-like protein... PLEC1 0.061 plectin 1 isoform 11 PLEC1 0.061 plectin 1 isoform 10 PLEC1 0.061 plectin 1 isoform 8 PLEC1 0.061 plectin 1 isoform 7 PLEC1 0.061 plectin 1 isoform 6 PLEC1 0.061 plectin 1 isoform 3 PLEC1 0.061 plectin 1 isoform 2 PLEC1 0.061 plectin 1 isoform 1 LOC653125 0.060 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653125 0.060 PREDICTED: similar to Golgin subfamily A member 8-l... MYO18B 0.058 myosin XVIIIB PPFIA2 0.058 PTPRF interacting protein alpha 2 LOC728498 0.058 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728498 0.058 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.058 PREDICTED: Golgin subfamily A member 8-like protein... CEP164 0.058 centrosomal protein 164kDa LOC653720 0.056 PREDICTED: similar to Golgin subfamily A member 8-l... LOC645202 0.056 PREDICTED: hypothetical protein LOC645202 FKBP15 0.056 FK506 binding protein 15, 133kDa LOC100133758 0.056 PREDICTED: hypothetical protein, partial LOC653073 0.056 PREDICTED: Golgin subfamily A member 8-like protein... LOC653061 0.055 PREDICTED: similar to Golgin subfamily A member 8-l... MYO18A 0.053 myosin 18A isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.