TCTN1 9913

Name: TCTN1	Sequence: fasta or formatted (573aa)		NCBI GI: 18543327
Description: tectonic family member 1 isoform 3		Referenced in: Hedgehog and Related Pathways
Other entries for this name: alt prot [587aa] tectonic family member 1 isoform 2 alt prot [592aa] tectonic family member 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 43 2 C cysteine 3.0 17 3 D aspartate 4.5 26 1 E glutamate 3.7 21 1 F phenylalanine 5.8 33 3 G glycine 5.8 33 1 H histidine 1.0 6 1 I isoleucine 4.2 24 2 K lysine 3.3 19 2 L leucine 9.4 54 2 M methionine 0.7 4 1 N asparagine 4.7 27 2 P proline 8.7 50 2 Q glutamine 4.9 28 2 R arginine 3.1 18 2 S serine 8.7 50 3 T threonine 8.4 48 2 V valine 9.2 53 3 W tryptophan 1.0 6 1 Y tyrosine 2.3 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tectonic family member 1 isoform 3 TCTN1 0.946 tectonic family member 1 isoform 2 TCTN1 0.941 tectonic family member 1 isoform 1 TCTN3 0.120 tectonic 3 isoform a precursor TCTN3 0.060 tectonic 3 isoform b precursor TCTN2 0.028 tectonic family member 2 isoform 2 TCTN2 0.028 tectonic family member 2 isoform 1 CYB561D1 0.018 cytochrome b-561 domain containing 1 isoform 5 [Hom... CYB561D1 0.018 cytochrome b-561 domain containing 1 isoform 4 [Hom... CYB561D1 0.017 cytochrome b-561 domain containing 1 isoform 1 [Hom... C8orf44 0.012 hypothetical protein LOC56260 LOC391359 0.011 PREDICTED: similar to hCG1784039 LOC100294457 0.011 PREDICTED: similar to hCG2038988 LOC100293561 0.011 PREDICTED: similar to Protein MOST-1 LOC360030 0.009 homeobox C14 TRIM33 0.008 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.008 tripartite motif-containing 33 protein isoform alpha... KRTAP10-2 0.007 keratin associated protein 10-2 KRTAP10-10 0.007 keratin associated protein 10-10 PAPPA2 0.007 pappalysin 2 isoform 1 LOC100130599 0.007 PREDICTED: hypothetical protein LOC100130599 0.007 PREDICTED: similar to Keratin-associated protein 10... CCDC9 0.007 coiled-coil domain containing 9 LOC400558 0.006 PREDICTED: hypothetical protein LOC400558 LOC400558 0.006 PREDICTED: hypothetical protein LOC400558 LOC400558 0.006 PREDICTED: hypothetical protein LOC400558 ZNF469 0.006 zinc finger protein 469 NARF 0.006 nuclear prelamin A recognition factor isoform b [Hom... TMEM119 0.006 transmembrane protein 119 KRTAP10-4 0.006 keratin associated protein 10-4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.