Guide to the Human Genome
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Name: CYB561D1 Sequence: fasta or formatted (128aa) NCBI GI: 197304733
Description:

cytochrome b-561 domain containing 1 isoform 5

Referenced in:

Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt prot [251aa] cytochrome b-561 domain containing 1 isoform 1
alt prot [172aa] cytochrome b-561 domain containing 1 isoform 3
alt prot [133aa] cytochrome b-561 domain containing 1 isoform 4
alt prot [229aa] cytochrome b-561 domain containing 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         11           1
 C cysteine            0.0          0           0
 D aspartate           1.6          2           1
 E glutamate           7.0          9           1
 F phenylalanine       4.7          6           2
 G glycine            10.9         14           2
 H histidine           2.3          3           1
 I isoleucine          2.3          3           1
 K lysine              0.8          1           1
 L leucine            13.3         17           1
 M methionine          3.9          5           1
 N asparagine          0.0          0           0
 P proline             9.4         12           1
 Q glutamine           1.6          2           1
 R arginine            7.8         10           2
 S serine              7.8         10           1
 T threonine           6.2          8           1
 V valine              4.7          6           1
 W tryptophan          4.7          6           1
 Y tyrosine            2.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome b-561 domain containing 1 isoform 5 [Hom... 
CYB561D1              0.735   cytochrome b-561 domain containing 1 isoform 4 [Hom...
CYB561D1              0.616   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.310   cytochrome b-561 domain containing 1 isoform 2 [Homo...
TCTN1                 0.086   tectonic family member 1 isoform 3 
C8orf44               0.082   hypothetical protein LOC56260 
CYB561D2              0.078   cytochrome b-561 domain containing 2 
LOC391359             0.049   PREDICTED: similar to hCG1784039 
LOC360030             0.049   homeobox C14 
LOC100293561          0.041   PREDICTED: similar to Protein MOST-1 
LOC100294457          0.033   PREDICTED: similar to hCG2038988 
LOC100133899          0.020   PREDICTED: hypothetical protein 
LOC100290382          0.020   PREDICTED: hypothetical protein XP_002347011 
LOC100289617          0.020   PREDICTED: hypothetical protein XP_002342956 
ZNF91                 0.016   zinc finger protein 91 
C6orf103              0.012   hypothetical protein LOC79747 
CCDC13                0.012   coiled-coil domain containing 13 
FUT10                 0.008   fucosyltransferase 10 
MIA                   0.008   melanoma inhibitory activity 
LOC100290470          0.008   PREDICTED: hypothetical protein XP_002347617 
LOC100287301          0.008   PREDICTED: hypothetical protein XP_002343447 
CXorf49               0.004   hypothetical protein LOC100130361 
CXorf49B              0.004   hypothetical protein LOC100132994 
SLC28A1               0.004   solute carrier family 28, member 1 isoform 1 
SEMA3B                0.004   semaphorin 3B isoform 2 precursor 
SEMA3B                0.004   semaphorin 3B isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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