LOC400558 8655

Name: LOC400558	Sequence: fasta or formatted (241aa)		NCBI GI: 169210101
Description: PREDICTED: hypothetical protein LOC400558		Not currently referenced in the text
Other entries for this name: alt prot {241aa} PREDICTED: hypothetical protein LOC400558 alt mRNA {241aa} PREDICTED: hypothetical protein LOC400558
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 18 2 C cysteine 4.6 11 1 D aspartate 2.1 5 1 E glutamate 1.7 4 1 F phenylalanine 1.7 4 1 G glycine 12.0 29 2 H histidine 2.9 7 1 I isoleucine 1.2 3 1 K lysine 0.4 1 1 L leucine 10.0 24 2 M methionine 1.2 3 1 N asparagine 0.4 1 1 P proline 18.7 45 2 Q glutamine 4.6 11 1 R arginine 5.4 13 1 S serine 8.3 20 3 T threonine 9.5 23 2 V valine 3.7 9 1 W tryptophan 3.7 9 2 Y tyrosine 0.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC400558 LOC400558 1.000 PREDICTED: hypothetical protein LOC400558 LOC400558 0.996 PREDICTED: hypothetical protein LOC400558 LOC440829 0.049 PREDICTED: transmembrane protein 46-like DMRTC2 0.043 DMRT-like family C2 ZNF469 0.039 zinc finger protein 469 CIC 0.039 capicua homolog LOC440829 0.039 PREDICTED: transmembrane protein 46-like SMARCA4 0.035 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.035 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.035 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.035 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.035 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.035 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.035 SWI/SNF-related matrix-associated actin-dependent re... NACA 0.033 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.033 PREDICTED: hypothetical protein LOC80164 PCLO 0.027 piccolo isoform 2 PCLO 0.027 piccolo isoform 1 LOC100294420 0.027 PREDICTED: similar to mucin 2 RERE 0.027 atrophin-1 like protein isoform b RERE 0.027 atrophin-1 like protein isoform a RERE 0.027 atrophin-1 like protein isoform a TERT 0.025 telomerase reverse transcriptase isoform 2 TERT 0.025 telomerase reverse transcriptase isoform 1 FLJ22184 0.025 PREDICTED: hypothetical protein FLJ22184 WIPF1 0.025 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.025 WAS/WASL interacting protein family, member 1 WBP11 0.025 WW domain binding protein 11 FAM71E2 0.023 hypothetical protein LOC284418 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.