LOC100291776 21500

Name: LOC100291776	Sequence: fasta or formatted (94aa)		NCBI GI: 239753150
Description: PREDICTED: similar to poly(A) binding protein, cytoplasmic 1		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.8 13 2 C cysteine 0.0 0 0 D aspartate 2.1 2 1 E glutamate 9.6 9 1 F phenylalanine 2.1 2 1 G glycine 3.2 3 1 H histidine 4.3 4 1 I isoleucine 4.3 4 1 K lysine 6.4 6 1 L leucine 12.8 12 2 M methionine 4.3 4 1 N asparagine 2.1 2 1 P proline 6.4 6 2 Q glutamine 7.4 7 1 R arginine 3.2 3 1 S serine 6.4 6 1 T threonine 4.3 4 1 V valine 6.4 6 2 W tryptophan 1.1 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to poly(A) binding protein, cyto... PABPC1 0.767 poly(A) binding protein, cytoplasmic 1 PABPC3 0.723 poly(A) binding protein, cytoplasmic 3 PABPC4 0.623 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.623 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.623 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC1L 0.491 poly(A)-binding protein, cytoplasmic 1-like UBR5 0.245 ubiquitin protein ligase E3 component n-recognin 5 [... LOC730429 0.195 PREDICTED: similar to ubiquitin protein ligase E3 c... LOC730429 0.195 PREDICTED: similar to ubiquitin protein ligase E3 c... RAP1GDS1 0.025 RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [... RAP1GDS1 0.025 RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [... RAP1GDS1 0.025 RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [... RAP1GDS1 0.025 RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [... RAP1GDS1 0.025 RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [... RAP1GDS1 0.025 RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [... TRO 0.019 trophinin isoform 5 TRO 0.019 trophinin isoform 2 TRO 0.019 trophinin isoform 2 SNX26 0.019 sorting nexin 26 MYH13 0.013 myosin, heavy polypeptide 13, skeletal muscle [Homo... HMGB1L1 0.013 high-mobility group box 1-like 1 MAS1L 0.013 MAS1 oncogene-like TSC1 0.013 tuberous sclerosis 1 protein isoform 4 LZTFL1 0.013 leucine zipper transcription factor-like 1 STX10 0.006 syntaxin 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.