PTGS1 9737

Name: PTGS1	Sequence: fasta or formatted (562aa)		NCBI GI: 18104969
Description: prostaglandin-endoperoxide synthase 1 isoform 2 precursor		Referenced in: Arachidonate, Prostaglandins, and Leukotrienes
Other entries for this name: alt prot [599aa] prostaglandin-endoperoxide synthase 1 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 22 2 C cysteine 2.3 13 2 D aspartate 3.9 22 2 E glutamate 5.9 33 2 F phenylalanine 6.4 36 2 G glycine 7.5 42 3 H histidine 3.2 18 2 I isoleucine 4.3 24 1 K lysine 4.4 25 2 L leucine 12.6 71 4 M methionine 3.0 17 1 N asparagine 3.2 18 1 P proline 8.2 46 2 Q glutamine 4.3 24 2 R arginine 5.5 31 2 S serine 5.2 29 1 T threonine 5.2 29 2 V valine 5.0 28 1 W tryptophan 1.8 10 1 Y tyrosine 4.3 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 prostaglandin-endoperoxide synthase 1 isoform 2 prec... PTGS1 0.984 prostaglandin-endoperoxide synthase 1 isoform 1 prec... PTGS2 0.606 prostaglandin-endoperoxide synthase 2 precursor [Homo... PXDN 0.026 peroxidasin TPO 0.022 thyroid peroxidase isoform a TPO 0.022 thyroid peroxidase isoform b TPO 0.022 thyroid peroxidase isoform d DUOX2 0.017 dual oxidase 2 precursor NRXN2 0.017 neurexin 2 isoform alpha-1 precursor NRXN2 0.017 neurexin 2 isoform alpha-2 precursor DUOX1 0.016 dual oxidase 1 precursor DUOX1 0.016 dual oxidase 1 precursor NRXN1 0.016 neurexin 1 isoform alpha2 precursor NRXN1 0.016 neurexin 1 isoform alpha1 precursor JAG1 0.016 jagged 1 precursor CRB1 0.015 crumbs homolog 1 precursor MPO 0.015 myeloperoxidase LPO 0.015 lactoperoxidase isoform 3 preproprotein LPO 0.015 lactoperoxidase isoform 1 preproprotein NRXN3 0.014 neurexin 3 isoform 1 precursor PXDNL 0.013 peroxidasin homolog-like NOTCH3 0.013 Notch homolog 3 NOTCH2 0.013 notch 2 preproprotein NOTCH1 0.012 notch1 preproprotein DLL1 0.012 delta-like 1 VWA2 0.012 von Willebrand factor A domain containing 2 SLIT2 0.011 slit homolog 2 EYS 0.011 eyes shut homolog isoform 1 SLIT3 0.010 slit homolog 3 SNED1 0.010 6720455I24Rik homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.