MED30 9710

Name: MED30	Sequence: fasta or formatted (178aa)		NCBI GI: 18087811
Description: TRAP/Mediator complex component TRAP25		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 13 2 C cysteine 1.7 3 1 D aspartate 5.6 10 2 E glutamate 6.2 11 2 F phenylalanine 2.2 4 1 G glycine 5.6 10 2 H histidine 0.6 1 1 I isoleucine 5.1 9 1 K lysine 5.1 9 2 L leucine 10.1 18 2 M methionine 4.5 8 1 N asparagine 6.7 12 1 P proline 6.2 11 2 Q glutamine 9.0 16 2 R arginine 7.9 14 2 S serine 3.4 6 1 T threonine 4.5 8 1 V valine 5.1 9 1 W tryptophan 0.6 1 1 Y tyrosine 2.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TRAP/Mediator complex component TRAP25 TRIM33 0.018 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.018 tripartite motif-containing 33 protein isoform alpha... CENPE 0.018 centromere protein E MYO5B 0.015 myosin VB CLIP1 0.015 restin isoform b CLIP1 0.015 restin isoform a EYA3 0.015 eyes absent 3 GOLGB1 0.015 golgi autoantigen, golgin subfamily b, macrogolgin ... IFT74 0.012 coiled-coil domain containing 2 isoform b IFT74 0.012 coiled-coil domain containing 2 isoform a IFT74 0.012 coiled-coil domain containing 2 isoform a IFT74 0.012 coiled-coil domain containing 2 isoform a CEP290 0.012 centrosomal protein 290kDa DHX34 0.012 DEAH (Asp-Glu-Ala-His) box polypeptide 34 APOE 0.009 apolipoprotein E precursor COLEC12 0.009 collectin sub-family member 12 HIRIP3 0.009 HIRA interacting protein 3 MFNG 0.009 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransfer... LMNB1 0.009 lamin B1 LEPREL1 0.009 leprecan-like 1 isoform a DNAH17 0.009 PREDICTED: dynein, axonemal, heavy chain 17 DNAH17 0.009 PREDICTED: dynein, axonemal, heavy chain 17 DNAH17 0.009 PREDICTED: dynein, axonemal, heavy chain 17 GOLGA4 0.009 golgi autoantigen, golgin subfamily a, 4 C6orf174 0.009 hypothetical protein LOC387104 LOC100129101 0.009 PREDICTED: hypothetical protein LOC100129101 0.009 PREDICTED: hypothetical protein LOC100129101 0.009 PREDICTED: hypothetical protein MIA3 0.009 melanoma inhibitory activity family, member 3 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.