APOE 29865

Name: APOE	Sequence: fasta or formatted (317aa)		NCBI GI: 4557325
Description: apolipoprotein E precursor		Referenced in: Epidermal Growth Factor Lipoproteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.3 39 2 C cysteine 0.6 2 1 D aspartate 3.5 11 2 E glutamate 12.6 40 2 F phenylalanine 1.3 4 1 G glycine 5.7 18 1 H histidine 0.6 2 1 I isoleucine 0.6 2 1 K lysine 4.1 13 1 L leucine 12.9 41 2 M methionine 2.5 8 1 N asparagine 0.3 1 1 P proline 2.5 8 1 Q glutamine 10.1 32 2 R arginine 10.7 34 1 S serine 4.4 14 2 T threonine 3.8 12 1 V valine 7.6 24 1 W tryptophan 2.5 8 1 Y tyrosine 1.3 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein E precursor APOA4 0.124 apolipoprotein A-IV precursor APOA1 0.058 apolipoprotein A-I preproprotein PLEC1 0.053 plectin 1 isoform 11 PLEC1 0.053 plectin 1 isoform 10 PLEC1 0.053 plectin 1 isoform 8 PLEC1 0.053 plectin 1 isoform 7 PLEC1 0.053 plectin 1 isoform 6 PLEC1 0.053 plectin 1 isoform 3 PLEC1 0.053 plectin 1 isoform 2 PLEC1 0.053 plectin 1 isoform 1 DCTN1 0.051 dynactin 1 isoform 4 DCTN1 0.051 dynactin 1 isoform 3 DCTN1 0.051 dynactin 1 isoform 2 DCTN1 0.051 dynactin 1 isoform 1 MYH7B 0.049 myosin, heavy polypeptide 7B, cardiac muscle, beta ... CCDC102A 0.049 coiled-coil domain containing 102A MYH14 0.046 myosin, heavy chain 14 isoform 1 MYH14 0.046 myosin, heavy chain 14 isoform 2 MYH14 0.046 myosin, heavy chain 14 isoform 3 MYH6 0.046 myosin heavy chain 6 APOA5 0.044 apolipoprotein AV ANKRD35 0.044 ankyrin repeat domain 35 MYH9 0.042 myosin, heavy polypeptide 9, non-muscle FAM184A 0.042 hypothetical protein LOC79632 isoform 2 FAM184A 0.042 hypothetical protein LOC79632 isoform 1 SWAP70 0.042 SWAP-70 protein MYH15 0.041 myosin, heavy polypeptide 15 MYH2 0.041 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.041 myosin, heavy chain 2, skeletal muscle, adult [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.