Guide to the Human Genome
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Name: MFNG Sequence: fasta or formatted (321aa) NCBI GI: 21536461
Description:

O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

Referenced in:

Protein Glycosylation
Notch Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         21           2
 C cysteine            3.4         11           1
 D aspartate           4.4         14           3
 E glutamate           4.0         13           2
 F phenylalanine       5.0         16           1
 G glycine             6.2         20           2
 H histidine           3.7         12           1
 I isoleucine          2.2          7           2
 K lysine              2.8          9           1
 L leucine            15.9         51           3
 M methionine          1.9          6           1
 N asparagine          2.8          9           1
 P proline             8.1         26           2
 Q glutamine           5.0         16           1
 R arginine            8.1         26           1
 S serine              6.2         20           1
 T threonine           5.6         18           2
 V valine              4.7         15           2
 W tryptophan          1.6          5           1
 Y tyrosine            1.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   O-fucosylpeptide 3-beta-N-acetylglucosaminyltransfer... 
LFNG                  0.537   lunatic fringe isoform a 
LFNG                  0.481   lunatic fringe isoform b 
RFNG                  0.479   radical fringe 
B3GALTL               0.028   beta 1,3-galactosyltransferase-like 
CHPF2                 0.019   chondroitin polymerizing factor 2 
CHSY1                 0.014   chondroitin sulfate synthase 1 
CHSY3                 0.012   chondroitin sulfate synthase 3 
ZFPM2                 0.008   zinc finger protein, multitype 2 
B3GNT4                0.006   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
C1GALT1               0.006   core 1 synthase, glycoprotein-N-acetylgalactosamine 3...
SPON1                 0.005   spondin 1, extracellular matrix protein 
MED30                 0.005   TRAP/Mediator complex component TRAP25 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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