Guide to the Human Genome
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Name: EYA3 Sequence: fasta or formatted (573aa) NCBI GI: 26667243
Description:

eyes absent 3

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         39           3
 C cysteine            1.0          6           1
 D aspartate           5.4         31           2
 E glutamate           5.8         33           3
 F phenylalanine       2.6         15           2
 G glycine             6.3         36           2
 H histidine           1.9         11           1
 I isoleucine          4.9         28           3
 K lysine              4.7         27           2
 L leucine             8.0         46           3
 M methionine          2.1         12           1
 N asparagine          3.3         19           1
 P proline             5.9         34           2
 Q glutamine           6.8         39           2
 R arginine            3.1         18           1
 S serine             12.2         70           3
 T threonine           8.4         48           3
 V valine              5.6         32           2
 W tryptophan          0.9          5           1
 Y tyrosine            4.2         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eyes absent 3 
EYA4                  0.497   eyes absent 4 isoform d 
EYA4                  0.492   eyes absent 4 isoform b 
EYA4                  0.491   eyes absent 4 isoform a 
EYA1                  0.468   eyes absent 1 isoform b 
EYA1                  0.468   eyes absent 1 isoform b 
EYA1                  0.468   eyes absent 1 isoform a 
EYA1                  0.402   eyes absent 1 isoform c 
EYA2                  0.389   eyes absent 2 isoform a 
EYA2                  0.389   eyes absent 2 isoform b 
EYA2                  0.389   eyes absent 2 isoform a 
EYA2                  0.389   eyes absent 2 isoform a 
EYA2                  0.375   eyes absent 2 isoform c 
TPR                   0.026   nuclear pore complex-associated protein TPR 
LOC100134138          0.020   PREDICTED: similar to mucin, partial 
MUC12                 0.020   PREDICTED: mucin 12 
MUC12                 0.020   PREDICTED: mucin 12, cell surface associated 
MUC3A                 0.020   PREDICTED: mucin 3A, cell surface associated, parti...
LOC100133790          0.018   PREDICTED: intestinal mucin-like, partial 
LOC100131514          0.018   PREDICTED: similar to hCG1747327, partial 
MUC6                  0.017   mucin 6, gastric 
LOC100133408          0.016   PREDICTED: similar to mucin 
MUC16                 0.016   mucin 16 
FAM65A                0.015   hypothetical protein LOC79567 
ATXN7L1               0.015   ataxin 7-like 1 isoform 1 
ATXN7L1               0.015   ataxin 7-like 1 isoform 3 
NUP214                0.015   nucleoporin 214kDa 
LOC100131251          0.014   PREDICTED: hypothetical protein 
LOC100131251          0.014   PREDICTED: hypothetical protein 
EWSR1                 0.013   Ewing sarcoma breakpoint region 1 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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