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Search of human proteins with 17978485
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17978485 vacuolar protein sorting 18 [Homo sapiens]
(973 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17978485 vacuolar protein sorting 18 [Homo sapiens] 1969 0.0
gi|17978477 vacuolar protein sorting 11 [Homo sapiens] 62 2e-09
gi|114199473 vacuolar protein sorting 41 isoform 2 [Homo sapiens] 45 3e-04
gi|114199475 vacuolar protein sorting 41 isoform 1 [Homo sapiens] 45 3e-04
gi|13569903 ring finger protein 32 [Homo sapiens] 36 0.20
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 35 0.34
gi|239787821 syncoilin, intermediate filament 1 isoform 2 [Homo ... 33 1.3
gi|166706887 syncoilin, intermediate filament 1 isoform 1 [Homo ... 33 1.3
gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo s... 33 1.3
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l... 33 1.3
gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein... 33 1.7
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 33 1.7
gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo sap... 32 2.2
gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo sap... 32 2.2
gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo ... 32 2.2
gi|225903455 tripartite motif-containing 77 [Homo sapiens] 32 2.2
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 32 2.2
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l... 32 2.9
gi|81295809 pericentrin [Homo sapiens] 32 2.9
gi|24308069 zinc finger protein 521 [Homo sapiens] 32 3.8
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 32 3.8
gi|195546919 growth arrest-specific 7 isoform d [Homo sapiens] 32 3.8
gi|41406080 growth arrest-specific 7 isoform c [Homo sapiens] 32 3.8
gi|41406078 growth arrest-specific 7 isoform b [Homo sapiens] 32 3.8
gi|41406076 growth arrest-specific 7 isoform a [Homo sapiens] 32 3.8
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa... 32 3.8
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s... 32 3.8
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s... 32 3.8
gi|7656959 calpain 7 [Homo sapiens] 32 3.8
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 31 4.9
>gi|17978485 vacuolar protein sorting 18 [Homo sapiens]
Length = 973
Score = 1969 bits (5102), Expect = 0.0
Identities = 973/973 (100%), Positives = 973/973 (100%)
Query: 1 MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL 60
MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
Sbjct: 1 MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL 60
Query: 61 VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE 120
VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
Sbjct: 61 VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE 120
Query: 121 VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG 180
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG
Sbjct: 121 VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG 180
Query: 181 LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE 240
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE
Sbjct: 181 LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE 240
Query: 241 AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG 300
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
Sbjct: 241 AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG 300
Query: 301 RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL 360
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
Sbjct: 301 RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL 360
Query: 361 EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD 420
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
Sbjct: 361 EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD 420
Query: 421 CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL 480
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
Sbjct: 421 CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL 480
Query: 481 KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR 540
KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR
Sbjct: 481 KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR 540
Query: 541 ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP 600
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
Sbjct: 541 ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP 600
Query: 601 ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE 660
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE
Sbjct: 601 ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE 660
Query: 661 QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL 720
QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
Sbjct: 661 QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL 720
Query: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
Sbjct: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
Query: 781 PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL 840
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
Sbjct: 781 PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL 840
Query: 841 RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR 900
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
Sbjct: 841 RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR 900
Query: 901 KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI 960
KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
Sbjct: 901 KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI 960
Query: 961 DPQRYEEEQLSWL 973
DPQRYEEEQLSWL
Sbjct: 961 DPQRYEEEQLSWL 973
>gi|17978477 vacuolar protein sorting 11 [Homo sapiens]
Length = 941
Score = 62.4 bits (150), Expect = 2e-09
Identities = 90/428 (21%), Positives = 168/428 (39%), Gaps = 57/428 (13%)
Query: 491 LTTWLTELYLSRLGALQGDPEALTLYRETKECFRT--FLSSPRHKEWLFASRASIHELLA 548
LT +L L+ L L Y + K+ + F+ E F +I ++L
Sbjct: 436 LTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKKKSESEVHFDVETAI-KVLR 494
Query: 549 SHGDTEHMVYFAVIMQDYERVVAYHCQH-EAYEEALAVLARHRDPQL---FYKFSPILIR 604
G H +Y A +E + + + Y+EAL + + Q ++ IL+
Sbjct: 495 QAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQAESNMKRYGKILMH 554
Query: 605 HIPRQLVDAWIEM-----------------GSRLDARQLIPALVNYSQGGEVQQVSQAIR 647
HIP Q + G R ++ + IP N + +
Sbjct: 555 HIPEQTTQLLKGLCTDYRPSLEGRSDREAPGCRANSEEFIPIFANNPR--------ELKA 606
Query: 648 YMEFCVNVLGETEQAIHNYLLSL----YARGRPDSLLAYLEQAGAS---PHRVHYDLKYA 700
++E V ++ Q I++ LL L +A + + L S R A
Sbjct: 607 FLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAISLLKSGRFCDVFDKA 666
Query: 701 LRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIA 760
L LC H +++Y+ +L+++ + +Q + +Q + E E LW +
Sbjct: 667 LVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQ--YRQVISVCERHGEQDPSLWEQAL 724
Query: 761 RHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQ 820
+ ++EED + +A + ++ ++++P T+ H A S ++ Y +Q+LQ
Sbjct: 725 SYFARKEEDCKEYVAAVLKH--IENKNLMPPLLVVQTLAHNSTATLSVIRDYL--VQKLQ 780
Query: 821 REMEEATASAQRIRR----------DLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLC 870
++ ++ R+RR ++QEL+ + + KC+ C+ L P FLC
Sbjct: 781 KQSQQIAQDELRVRRYREETTRIRQEIQELKAS-PKIFQKTKCSICN-SALELPSVHFLC 838
Query: 871 GHMFHADC 878
GH FH C
Sbjct: 839 GHSFHQHC 846
>gi|114199473 vacuolar protein sorting 41 isoform 2 [Homo sapiens]
Length = 829
Score = 45.1 bits (105), Expect = 3e-04
Identities = 46/227 (20%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
Query: 661 QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL 720
Q H +SLYA +LL +L + H L+ AL +C + V++ +
Sbjct: 585 QRYHEKQISLYAEYDRPNLLPFLRDS------THCPLEKALEICQQRNFVEETVYLLSRM 638
Query: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
A+ + ++ D+ K E+D+ +LW + + + + + + + +
Sbjct: 639 GNSRSALKMIMEELHDVDKAIEFAKEQDDG---ELWEDLILYSIDKPPFITGLLNNIGTH 695
Query: 781 --PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQ 838
P+L I + + + I + ++++ L+ YN I + + A + + + +
Sbjct: 696 VDPILLIHRI----KEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMH 751
Query: 839 ELRGRYGTVEPQDKCATCDFPLLN----RPF--YLFLCGHMFHADCL 879
+ + V+ ++ C +C P+L +PF +F C HMFH +CL
Sbjct: 752 RTQMKGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECL 798
>gi|114199475 vacuolar protein sorting 41 isoform 1 [Homo sapiens]
Length = 854
Score = 45.1 bits (105), Expect = 3e-04
Identities = 46/227 (20%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
Query: 661 QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL 720
Q H +SLYA +LL +L + H L+ AL +C + V++ +
Sbjct: 610 QRYHEKQISLYAEYDRPNLLPFLRDS------THCPLEKALEICQQRNFVEETVYLLSRM 663
Query: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
A+ + ++ D+ K E+D+ +LW + + + + + + + +
Sbjct: 664 GNSRSALKMIMEELHDVDKAIEFAKEQDDG---ELWEDLILYSIDKPPFITGLLNNIGTH 720
Query: 781 --PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQ 838
P+L I + + + I + ++++ L+ YN I + + A + + + +
Sbjct: 721 VDPILLIHRI----KEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMH 776
Query: 839 ELRGRYGTVEPQDKCATCDFPLLN----RPF--YLFLCGHMFHADCL 879
+ + V+ ++ C +C P+L +PF +F C HMFH +CL
Sbjct: 777 RTQMKGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECL 823
>gi|13569903 ring finger protein 32 [Homo sapiens]
Length = 362
Score = 35.8 bits (81), Expect = 0.20
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 30/114 (26%)
Query: 791 FFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQ 850
F F I H +CS YN +I+EL E+++ A + + + L+E G T E
Sbjct: 225 FEKKFTEISH--RILCS----YNTNIEELFAEIDQCLAINRSVLQQLEEKCGHEITEEEW 278
Query: 851 DK------------CATCDFPL------------LNRPFYLFLCGHMFHADCLL 880
+K C+ C PL +R L C H+FH CLL
Sbjct: 279 EKIQVQALRRETHECSICLAPLSAAGGQRVGAGRRSREMALLSCSHVFHHACLL 332
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 35.0 bits (79), Expect = 0.34
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 728 DLALQVDVDLAKQCA----DLPEEDE--ELRKKLWLKIARHVVQEEEDVQTAMACLASCP 781
D L+++V++ A DL DE E +K+L +K R + E ED + A LA
Sbjct: 1560 DAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELEAELEDERKQRA-LAVAS 1618
Query: 782 LLKIE-DVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL 840
K+E D+ + ++ + L+ +++ QRE+EEA AS I +E
Sbjct: 1619 KKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKES 1678
Query: 841 RGRYGTVEPQ 850
+ ++E +
Sbjct: 1679 EKKLKSLEAE 1688
>gi|239787821 syncoilin, intermediate filament 1 isoform 2 [Homo
sapiens]
Length = 476
Score = 33.1 bits (74), Expect = 1.3
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 637 GEVQQVSQAIRYMEFCVNVLGETEQAIHNYLL------SLYARGRPDSLLAYLEQAGASP 690
G QQ QA+ +E E +Q IH +L + D L AY A A
Sbjct: 177 GRFQQCVQAVAQLE------EERDQLIHELVLLREPALQEVQQVHQDILAAYKLHAQAEL 230
Query: 691 HR---------VHYDLKYALRLCAEHGHHRACVH--VYKVLELYEEAVDLALQVDVDLAK 739
R V L + C + + C V + + E A Q+ +LA+
Sbjct: 231 ERDGLREEIRLVKQKLFKVTKECVAYQYQLECRQQDVAQFADFREVLTTRATQLSEELAQ 290
Query: 740 QCADLPEEDEELRKKLWLKIAR---HVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFV 796
++ E+LR++L ++ H +QE + L + +E+ + P F+
Sbjct: 291 LRDAYQKQKEQLRQQLEAPPSQRDGHFLQESRRLSAQFENLMAESRQDLEE--EYEPQFL 348
Query: 797 TIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTV 847
+ KEA +L+ IQE++ + A A+++R + L + V
Sbjct: 349 RLLERKEAGTKALQRTQAEIQEMKEALRPLQAEARQLRLQNRNLEDQIALV 399
>gi|166706887 syncoilin, intermediate filament 1 isoform 1 [Homo
sapiens]
Length = 482
Score = 33.1 bits (74), Expect = 1.3
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 637 GEVQQVSQAIRYMEFCVNVLGETEQAIHNYLL------SLYARGRPDSLLAYLEQAGASP 690
G QQ QA+ +E E +Q IH +L + D L AY A A
Sbjct: 177 GRFQQCVQAVAQLE------EERDQLIHELVLLREPALQEVQQVHQDILAAYKLHAQAEL 230
Query: 691 HR---------VHYDLKYALRLCAEHGHHRACVH--VYKVLELYEEAVDLALQVDVDLAK 739
R V L + C + + C V + + E A Q+ +LA+
Sbjct: 231 ERDGLREEIRLVKQKLFKVTKECVAYQYQLECRQQDVAQFADFREVLTTRATQLSEELAQ 290
Query: 740 QCADLPEEDEELRKKLWLKIAR---HVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFV 796
++ E+LR++L ++ H +QE + L + +E+ + P F+
Sbjct: 291 LRDAYQKQKEQLRQQLEAPPSQRDGHFLQESRRLSAQFENLMAESRQDLEE--EYEPQFL 348
Query: 797 TIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTV 847
+ KEA +L+ IQE++ + A A+++R + L + V
Sbjct: 349 RLLERKEAGTKALQRTQAEIQEMKEALRPLQAEARQLRLQNRNLEDQIALV 399
>gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo
sapiens]
Length = 1102
Score = 33.1 bits (74), Expect = 1.3
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 892 QARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSRE--------QLKADLDELV 940
+ +++ELQ KLG P + + EA G GP E + KADL ELV
Sbjct: 509 EQQVKELQEKLGEVKDPVASAQKEPEAARGPGAPGPGGESSSFMDHLEEKADLSELV 565
>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 602
Score = 33.1 bits (74), Expect = 1.3
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 34/165 (20%)
Query: 790 PFFPDFVTIDHFK---EAICSSLKAY---NHHIQELQREMEEATASAQRIRRDLQELRGR 843
P P V + H + E + L+A N I L + EE RIR + LR +
Sbjct: 299 PAVPSEVELQHLRKELERVAGELQAQVKNNQRISLLNQRQEE------RIREQEERLRKQ 352
Query: 844 YGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLG 903
++ Q K L +P +F + + L + +++ELQ KLG
Sbjct: 353 EERIQEQHK----SLQQLAKPQSVFEEPNNENKSTL----------QLEQQVKELQEKLG 398
Query: 904 AAPPPAKGSARAKEAEGGAATAGPSRE--------QLKADLDELV 940
+ + EA G A GP E + KADL ELV
Sbjct: 399 EVKESETSAQKEPEAARGPAAPGPGGESSSFMDHLEEKADLSELV 443
>gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 2 [Homo sapiens]
Length = 602
Score = 32.7 bits (73), Expect = 1.7
Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 34/165 (20%)
Query: 790 PFFPDFVTIDHFK---EAICSSLKAY---NHHIQELQREMEEATASAQRIRRDLQELRGR 843
P P V + H + E + L+A N I L + EE RIR + LR +
Sbjct: 299 PAVPSEVELQHLRKELERVAGELQAQVKNNQRISLLNQRQEE------RIREQEERLRKQ 352
Query: 844 YGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLG 903
++ Q K L +P +F + + + L + +++ELQ KLG
Sbjct: 353 EERIQEQHK----SLQQLAKPQSVFKEPNNENKNAL----------QLEQQVKELQEKLG 398
Query: 904 AAPPPAKGSARAKEAEGGAATAGPSRE--------QLKADLDELV 940
+ + EA G GP E + KADL ELV
Sbjct: 399 EVKETETSAQKEPEAARGPGAPGPGGESSSFMDHLEEKADLSELV 443
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 32.7 bits (73), Expect = 1.7
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 808 SLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQDK 852
SL++ +H Q L+ E+ E A Q +RRDL+ LR +E +K
Sbjct: 774 SLESSSHKTQTLESELGELEAERQALRRDLEALRLANAQLEGAEK 818
>gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 32.3 bits (72), Expect = 2.2
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
E+YE+ +++ + DV+L + D+ + +E LR + Q L++
Sbjct: 233 EMYEKLKEMSCKADVNLPQDLGDVMKRNEFLRLAM--------------PQPVNPQLSAW 278
Query: 781 PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATAS 829
+ + + L FF ++T+D ICS+ K ++ LQ +++ S
Sbjct: 279 TITGVSERLNFFRVYITLD---RKICSNHKLLFEDLRHLQCSLDDTDMS 324
>gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 32.3 bits (72), Expect = 2.2
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
E+YE+ +++ + DV+L + D+ + +E LR + Q L++
Sbjct: 233 EMYEKLKEMSCKADVNLPQDLGDVMKRNEFLRLAM--------------PQPVNPQLSAW 278
Query: 781 PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATAS 829
+ + + L FF ++T+D ICS+ K ++ LQ +++ S
Sbjct: 279 TITGVSERLNFFRVYITLD---RKICSNHKLLFEDLRHLQCSLDDTDMS 324
>gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo
sapiens]
Length = 450
Score = 32.3 bits (72), Expect = 2.2
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
E+YE+ +++ + DV+L + D+ + +E LR + Q L++
Sbjct: 228 EMYEKLKEMSCKADVNLPQDLGDVMKRNEFLRLAM--------------PQPVNPQLSAW 273
Query: 781 PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATAS 829
+ + + L FF ++T+D ICS+ K ++ LQ +++ S
Sbjct: 274 TITGVSERLNFFRVYITLD---RKICSNHKLLFEDLRHLQCSLDDTDMS 319
>gi|225903455 tripartite motif-containing 77 [Homo sapiens]
Length = 450
Score = 32.3 bits (72), Expect = 2.2
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
E+YE+ +++ + DV+L + D+ + +E LR + Q L++
Sbjct: 228 EMYEKLKEMSCKADVNLPQDLGDVMKRNEFLRLAM--------------PQPVNPQLSAW 273
Query: 781 PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATAS 829
+ + + L FF ++T+D ICS+ K ++ LQ +++ S
Sbjct: 274 TITGVSERLNFFRVYITLD---RKICSNHKLLFEDLRHLQCSLDDTDMS 319
>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 32.3 bits (72), Expect = 2.2
Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 25/124 (20%)
Query: 845 GTVEPQDKCATCDFPL---LNRPFYLFLCGHMFHADCLLQAV--RPGLPAYKQARL--EE 897
G V+P KCA C L L P CGH+F A C+L V PA + RL +E
Sbjct: 10 GDVDPDLKCALCHKVLEDPLTTP-----CGHVFCAGCVLPWVVQEGSCPARCRGRLSAKE 64
Query: 898 LQRKLGAAPPPAKGSARAKEAEGGAATAGPSR----EQLKADLD--ELVAAECVY--CGE 949
L L P K + + AT G R +QL L+ + A C + CG+
Sbjct: 65 LNHVL-----PLKRLILKLDIKCAYATRGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQ 119
Query: 950 LMIR 953
+++R
Sbjct: 120 VLLR 123
>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 601
Score = 32.0 bits (71), Expect = 2.9
Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 34/171 (19%)
Query: 790 PFFPDFVTIDHFK---EAICSSLKAY---NHHIQELQREMEEATASAQRIRRDLQELRGR 843
P P V + H + E + L+A N I L + EE RI+ + LR +
Sbjct: 299 PAVPSEVELQHLRKELERVAGELQAQVKKNQRISLLNQRQEE------RIQEQEERLRKQ 352
Query: 844 YGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLG 903
++ Q K L +P +F + + + L + +++ELQ KLG
Sbjct: 353 EERIQEQHK----SLQQLAKPQSVFEEPNNENKNAL----------QLEQQVKELQEKLG 398
Query: 904 AAPPPAKGSARAKEAEGGAATAGPSRE--------QLKADLDELVAAECVY 946
+ + EA G GP E + KADL ELV E +
Sbjct: 399 EVKETETSAQKEPEAARGPGAPGPGGESSSFMDHLKEKADLSELVKKELCF 449
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 32.0 bits (71), Expect = 2.9
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 28/223 (12%)
Query: 638 EVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYA-----RGRPDSLLAYLEQAGASPHR 692
E Q+ +A+R + L T +A+H L R +P L A LEQ+ P
Sbjct: 2825 EAQKHCEALRREKEVSATLKSTVEALHTQKRELRCSLEREREKPAWLQAELEQS--HPRL 2882
Query: 693 VHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAV-DLALQVDVDLAK------QCADLP 745
+ + A R AE A ++ + +E + +L LQ DL K DL
Sbjct: 2883 KEQEGRKAARRSAEARQSPAAAEQWRKWQRDKEKLRELELQRQRDLHKIKQLQQTVRDLE 2942
Query: 746 EEDEELRKKLWLKIAR--------HVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFV- 796
+DE +L L AR H+ +++ +++ L S L + F V
Sbjct: 2943 SKDEVPGSRLHLGSARRAAGSDADHLREQQRELEAMRQRLLSAARL----LTSFTSQAVD 2998
Query: 797 -TIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQ 838
T++ + + ++ + H ++EL+ ++ T+S +++ +LQ
Sbjct: 2999 RTVNDWTSSNEKAVMSLLHTLEELKSDLSRPTSSQKKMAAELQ 3041
>gi|24308069 zinc finger protein 521 [Homo sapiens]
Length = 1311
Score = 31.6 bits (70), Expect = 3.8
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 904 AAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSI 955
AAPP K R + A+ GPS +Q K V C+YC + + S+
Sbjct: 373 AAPPIPKSRGRKRAAQQTPDMTGPSSKQAK------VTYSCIYCNKQLFSSL 418
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 31.6 bits (70), Expect = 3.8
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 746 EEDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLK------IEDVLPFFPDF---- 795
EE EE +KKL A+ + + EE+ +TA + AS K +ED++
Sbjct: 1388 EELEEAKKKL----AQRLQEAEENTETANSKCASLEKTKQRLQGEVEDLMRDLERSHTAC 1443
Query: 796 VTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQ 850
T+D + L + + E Q E+E A ++ + +L ++R Y V Q
Sbjct: 1444 ATLDKKQRNFDKVLAEWKQKLDESQAELEAAQKESRSLSTELFKMRNAYEEVVDQ 1498
>gi|195546919 growth arrest-specific 7 isoform d [Homo sapiens]
Length = 412
Score = 31.6 bits (70), Expect = 3.8
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 731 LQVDVDLAKQCADLPE-----EDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKI 785
++++ D AK A L + ++E + W ++ + + E E A L S ++
Sbjct: 181 IKIEEDYAKNLAKLSQNSLASQEEGSLGEAWAQVKKSLADEAEVHLKFSAKLHS----EV 236
Query: 786 EDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQE 839
E L +F+E +K +HHI +L++++ AS ++ R+ L E
Sbjct: 237 EKPLM---------NFRENFKKDMKKCDHHIADLRKQLASRYASVEKARKALTE 281
>gi|41406080 growth arrest-specific 7 isoform c [Homo sapiens]
Length = 476
Score = 31.6 bits (70), Expect = 3.8
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 731 LQVDVDLAKQCADLPE-----EDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKI 785
++++ D AK A L + ++E + W ++ + + E E A L S ++
Sbjct: 245 IKIEEDYAKNLAKLSQNSLASQEEGSLGEAWAQVKKSLADEAEVHLKFSAKLHS----EV 300
Query: 786 EDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQE 839
E L +F+E +K +HHI +L++++ AS ++ R+ L E
Sbjct: 301 EKPLM---------NFRENFKKDMKKCDHHIADLRKQLASRYASVEKARKALTE 345
>gi|41406078 growth arrest-specific 7 isoform b [Homo sapiens]
Length = 416
Score = 31.6 bits (70), Expect = 3.8
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 731 LQVDVDLAKQCADLPE-----EDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKI 785
++++ D AK A L + ++E + W ++ + + E E A L S ++
Sbjct: 185 IKIEEDYAKNLAKLSQNSLASQEEGSLGEAWAQVKKSLADEAEVHLKFSAKLHS----EV 240
Query: 786 EDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQE 839
E L +F+E +K +HHI +L++++ AS ++ R+ L E
Sbjct: 241 EKPLM---------NFRENFKKDMKKCDHHIADLRKQLASRYASVEKARKALTE 285
>gi|41406076 growth arrest-specific 7 isoform a [Homo sapiens]
Length = 336
Score = 31.6 bits (70), Expect = 3.8
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 731 LQVDVDLAKQCADLPE-----EDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKI 785
++++ D AK A L + ++E + W ++ + + E E A L S ++
Sbjct: 105 IKIEEDYAKNLAKLSQNSLASQEEGSLGEAWAQVKKSLADEAEVHLKFSAKLHS----EV 160
Query: 786 EDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQE 839
E L +F+E +K +HHI +L++++ AS ++ R+ L E
Sbjct: 161 EKPLM---------NFRENFKKDMKKCDHHIADLRKQLASRYASVEKARKALTE 205
>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
sapiens]
Length = 395
Score = 31.6 bits (70), Expect = 3.8
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 24/151 (15%)
Query: 718 KVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKI-ARHVVQEEEDVQTAMAC 776
+V + +EE V L+ + D DL D+ E++E + L ++ A+ V+++E DV+
Sbjct: 131 QVAQRHEEKVYLS-RGDEDLG----DMGEDEEAQFRMLMDRLGAQKVLEDESDVKQLWLQ 185
Query: 777 LASCPLLKIEDVLPFFPDFVT--IDHFKEA----------ICSSLKAYNHHIQELQREME 824
L + +L F DF+T I +EA + + AY+ IQ L EME
Sbjct: 186 LKK----EEPHLLSNFEDFLTRIISQLQEAHEEKNELECALKRKIAAYDEEIQHLYEEME 241
Query: 825 EATAS--AQRIRRDLQELRGRYGTVEPQDKC 853
+ S Q + +D + + R +E + C
Sbjct: 242 QQIKSEKEQFLLKDTERFQARSQELEQKLLC 272
>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
sapiens]
Length = 462
Score = 31.6 bits (70), Expect = 3.8
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 24/151 (15%)
Query: 718 KVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKI-ARHVVQEEEDVQTAMAC 776
+V + +EE V L+ + D DL D+ E++E + L ++ A+ V+++E DV+
Sbjct: 131 QVAQRHEEKVYLS-RGDEDLG----DMGEDEEAQFRMLMDRLGAQKVLEDESDVKQLWLQ 185
Query: 777 LASCPLLKIEDVLPFFPDFVT--IDHFKEA----------ICSSLKAYNHHIQELQREME 824
L + +L F DF+T I +EA + + AY+ IQ L EME
Sbjct: 186 LKK----EEPHLLSNFEDFLTRIISQLQEAHEEKNELECALKRKIAAYDEEIQHLYEEME 241
Query: 825 EATAS--AQRIRRDLQELRGRYGTVEPQDKC 853
+ S Q + +D + + R +E + C
Sbjct: 242 QQIKSEKEQFLLKDTERFQARSQELEQKLLC 272
>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
sapiens]
Length = 731
Score = 31.6 bits (70), Expect = 3.8
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 24/151 (15%)
Query: 718 KVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKI-ARHVVQEEEDVQTAMAC 776
+V + +EE V L+ + D DL D+ E++E + L ++ A+ V+++E DV+
Sbjct: 131 QVAQRHEEKVYLS-RGDEDLG----DMGEDEEAQFRMLMDRLGAQKVLEDESDVKQLWLQ 185
Query: 777 LASCPLLKIEDVLPFFPDFVT--IDHFKEA----------ICSSLKAYNHHIQELQREME 824
L + +L F DF+T I +EA + + AY+ IQ L EME
Sbjct: 186 LKK----EEPHLLSNFEDFLTRIISQLQEAHEEKNELECALKRKIAAYDEEIQHLYEEME 241
Query: 825 EATAS--AQRIRRDLQELRGRYGTVEPQDKC 853
+ S Q + +D + + R +E + C
Sbjct: 242 QQIKSEKEQFLLKDTERFQARSQELEQKLLC 272
>gi|7656959 calpain 7 [Homo sapiens]
Length = 813
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 18/131 (13%)
Query: 640 QQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHY--DL 697
++ +QA+ Y E + L ++ I YL R +L + ++ A P + + DL
Sbjct: 34 KEAAQALIYAEMAGSSLENIQEKITEYL------ERVQALHSAVQSKSADPLKSKHQLDL 87
Query: 698 KYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWL 757
+ A L + +V +ELY EAVDL L+ + A D+ L+ KL
Sbjct: 88 ERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCLKTSYETA---------DKVLQNKL-K 137
Query: 758 KIARHVVQEEE 768
++AR + E
Sbjct: 138 QLARQALDRAE 148
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 31.2 bits (69), Expect = 4.9
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 718 KVLEL-YEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMAC 776
K LE+ EE V ++++ + + DL ++++ L K+L + R + E+ +
Sbjct: 2024 KALEIDVEEQVSRFIELEQEKNTELMDLRQQNQALEKQL--EKMRKFLDEQAIDREHERD 2081
Query: 777 LASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRD 836
+ + K+E L P F I + L +H++E + E S ++++RD
Sbjct: 2082 VFQQEIQKLEQQLKVVPRFQPISEHQTREVEQLA---NHLKEKTDKCSELLLSKEQLQRD 2138
Query: 837 LQE 839
+QE
Sbjct: 2139 IQE 2141
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,555,295
Number of Sequences: 37866
Number of extensions: 1776576
Number of successful extensions: 5936
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 5887
Number of HSP's gapped (non-prelim): 88
length of query: 973
length of database: 18,247,518
effective HSP length: 112
effective length of query: 861
effective length of database: 14,006,526
effective search space: 12059618886
effective search space used: 12059618886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.