VPS41 1409

Name: VPS41	Sequence: fasta or formatted (854aa)		NCBI GI: 114199475
Description: vacuolar protein sorting 41 isoform 1		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [829aa] vacuolar protein sorting 41 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 40 2 C cysteine 2.5 21 1 D aspartate 6.4 55 2 E glutamate 9.8 84 4 F phenylalanine 3.3 28 1 G glycine 4.6 39 2 H histidine 3.6 31 2 I isoleucine 7.3 62 2 K lysine 8.1 69 3 L leucine 11.0 94 3 M methionine 2.5 21 1 N asparagine 3.6 31 2 P proline 3.6 31 2 Q glutamine 3.4 29 2 R arginine 4.7 40 1 S serine 6.9 59 2 T threonine 2.9 25 1 V valine 6.2 53 3 W tryptophan 1.2 10 1 Y tyrosine 3.7 32 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 41 isoform 1 VPS41 0.962 vacuolar protein sorting 41 isoform 2 VPS11 0.013 vacuolar protein sorting 11 VPS18 0.012 vacuolar protein sorting 18 SLC24A1 0.008 solute carrier family 24 (sodium/potassium/calcium ex... WDR61 0.006 WD repeat domain 61 CLTCL1 0.006 clathrin, heavy polypeptide-like 1 isoform 2 CLTCL1 0.006 clathrin, heavy polypeptide-like 1 isoform 1 LOXHD1 0.006 lipoxygenase homology domains 1 isoform 1 ZNF267 0.006 zinc finger protein 267 CDC2L2 0.005 cell division cycle 2-like 2 isoform 4 CDC2L2 0.005 cell division cycle 2-like 2 isoform 1 CACNA1F 0.005 calcium channel, voltage-dependent, L type, alpha 1F... CDC2L1 0.005 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.005 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.005 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.005 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.005 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.005 cell division cycle 2-like 1 (PITSLRE proteins) isof... EIF2C3 0.005 eukaryotic translation initiation factor 2C, 3 isofo... EIF2C3 0.005 eukaryotic translation initiation factor 2C, 3 isofo... WDR90 0.005 WD repeat domain 90 NDUFS3 0.005 NADH dehydrogenase (ubiquinone) Fe-S protein 3 precur... BAZ2B 0.005 bromodomain adjacent to zinc finger domain, 2B [Homo... CLTC 0.005 clathrin heavy chain 1 MYT1 0.005 myelin transcription factor 1 TTBK1 0.004 tau tubulin kinase 1 APEX1 0.004 APEX nuclease 1 APEX1 0.004 APEX nuclease 1 APEX1 0.004 APEX nuclease 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.