VPS11 9663

Name: VPS11	Sequence: fasta or formatted (941aa)		NCBI GI: 17978477
Description: vacuolar protein sorting 11		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 58 2 C cysteine 2.4 23 1 D aspartate 5.7 54 1 E glutamate 6.8 64 2 F phenylalanine 4.5 42 2 G glycine 5.3 50 2 H histidine 4.3 40 2 I isoleucine 4.9 46 2 K lysine 6.3 59 3 L leucine 11.2 105 3 M methionine 1.7 16 1 N asparagine 3.4 32 2 P proline 3.8 36 2 Q glutamine 6.5 61 2 R arginine 5.4 51 2 S serine 6.7 63 2 T threonine 4.9 46 2 V valine 5.3 50 2 W tryptophan 0.9 8 1 Y tyrosine 3.9 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 11 VPS18 0.020 vacuolar protein sorting 18 VPS41 0.012 vacuolar protein sorting 41 isoform 2 VPS41 0.012 vacuolar protein sorting 41 isoform 1 AMFR 0.009 autocrine motility factor receptor TTC3 0.008 tetratricopeptide repeat domain 3 TTC3 0.008 tetratricopeptide repeat domain 3 SYVN1 0.007 synoviolin 1 isoform b SYVN1 0.007 synoviolin 1 isoform a TOPORS 0.007 topoisomerase I binding, arginine/serine-rich RNF8 0.006 ring finger protein 8 isoform 1 RNF135 0.006 ring finger protein 135 isoform 2 RNF135 0.006 ring finger protein 135 isoform 1 JAKMIP1 0.006 janus kinase and microtubule interacting protein 1 i... JAKMIP1 0.006 janus kinase and microtubule interacting protein 1 ... MIB1 0.006 mindbomb homolog 1 CHFR 0.006 checkpoint with forkhead and ring finger domains is... CHFR 0.006 checkpoint with forkhead and ring finger domains is... CHFR 0.006 checkpoint with forkhead and ring finger domains is... CHFR 0.006 checkpoint with forkhead and ring finger domains is... CHFR 0.006 checkpoint with forkhead and ring finger domains is... RASSF9 0.006 Ras association (RalGDS/AF-6) domain family (N-term... XPOT 0.006 tRNA exportin TRAF5 0.005 TNF receptor-associated factor 5 TRAF5 0.005 TNF receptor-associated factor 5 TRAF5 0.005 TNF receptor-associated factor 5 RNF32 0.005 ring finger protein 32 RGPD1 0.005 RANBP2-like and GRIP domain containing 1 DZIP3 0.005 DAZ interacting protein 3, zinc finger RNF112 0.005 ring finger protein 112 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.