Guide to the Human Genome
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Name: GAS7 Sequence: fasta or formatted (476aa) NCBI GI: 41406080
Description:

growth arrest-specific 7 isoform c

Referenced in:

Additional Cell Cycle Functions
WW Domain

Other entries for this name:
alt prot [412aa] growth arrest-specific 7 isoform d
alt prot [336aa] growth arrest-specific 7 isoform a
alt prot [416aa] growth arrest-specific 7 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         27           2
 C cysteine            1.3          6           1
 D aspartate           4.6         22           2
 E glutamate           9.7         46           2
 F phenylalanine       2.5         12           1
 G glycine             5.9         28           2
 H histidine           2.7         13           2
 I isoleucine          2.9         14           1
 K lysine              8.0         38           2
 L leucine             8.8         42           3
 M methionine          2.9         14           1
 N asparagine          3.2         15           1
 P proline             6.3         30           4
 Q glutamine           6.3         30           2
 R arginine            6.1         29           2
 S serine              7.8         37           3
 T threonine           6.1         29           3
 V valine              4.6         22           1
 W tryptophan          2.1         10           2
 Y tyrosine            2.5         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth arrest-specific 7 isoform c 
GAS7                  0.863   growth arrest-specific 7 isoform b 
GAS7                  0.856   growth arrest-specific 7 isoform d 
GAS7                  0.650   growth arrest-specific 7 isoform a 
PSTPIP1               0.070   proline-serine-threonine phosphatase interacting pro...
FCHO1                 0.066   FCH domain only 1 isoform b 
FCHO1                 0.066   FCH domain only 1 isoform b 
FCHO1                 0.066   FCH domain only 1 isoform a 
PSTPIP2               0.061   proline-serine-threonine phosphatase interacting pr...
FCHO2                 0.057   FCH domain only 2 isoform a 
FCHO2                 0.055   FCH domain only 2 isoform b 
NOSTRIN               0.049   nitric oxide synthase trafficker isoform 2 
BAIAP2L1              0.035   BAI1-associated protein 2-like 1 
CRKL                  0.034   v-crk sarcoma virus CT10 oncogene homolog (avian)-lik...
FNBP1                 0.034   formin binding protein 1 
SETD2                 0.033   SET domain containing 2 
TRIP10                0.032   thyroid hormone receptor interactor 10 
FCHO1                 0.030   FCH domain only 1 isoform c 
SH3KBP1               0.030   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.030   SH3-domain kinase binding protein 1 isoform a 
PPFIA1                0.027   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.027   PTPRF interacting protein alpha 1 isoform b 
PPFIA3                0.027   PTPRF interacting protein alpha 3 
PACSIN2               0.027   protein kinase C and casein kinase substrate in neu...
SNX18                 0.025   sorting nexin 18 isoform c 
SNX18                 0.025   sorting nexin 18 isoform a 
SNX18                 0.025   sorting nexin 18 isoform b 
GOLGA4                0.025   golgi autoantigen, golgin subfamily a, 4 
MYH9                  0.025   myosin, heavy polypeptide 9, non-muscle 
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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