| Name: C3orf71 | Sequence: fasta or formatted (290aa) | NCBI GI: 176866318 | |
|
Description: hypothetical protein LOC646450
| Not currently referenced in the text | ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 12.8 37 3 C cysteine 1.4 4 1 D aspartate 2.8 8 1 E glutamate 2.8 8 1 F phenylalanine 2.8 8 1 G glycine 11.0 32 2 H histidine 1.4 4 1 I isoleucine 3.1 9 1 K lysine 2.1 6 1 L leucine 9.0 26 2 M methionine 1.0 3 1 N asparagine 1.0 3 1 P proline 9.0 26 2 Q glutamine 3.8 11 1 R arginine 12.8 37 4 S serine 8.3 24 2 T threonine 6.2 18 2 V valine 7.9 23 2 W tryptophan 0.0 0 0 Y tyrosine 1.0 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC646450 ANKRD56 0.031 ankyrin repeat domain 56 FLJ37078 0.026 hypothetical protein LOC222183 PRR12 0.026 proline rich 12 LOC339742 0.022 PREDICTED: hypothetical protein LOC100290023 0.022 PREDICTED: hypothetical protein XP_002348147 COL4A3 0.022 alpha 3 type IV collagen isoform 4 precursor LOC100293055 0.020 PREDICTED: similar to COL22A1 protein COL4A3 0.020 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.020 alpha 3 type IV collagen isoform 1 precursor COL9A3 0.020 alpha 3 type IX collagen COL22A1 0.020 collagen, type XXII, alpha 1 BSN 0.020 bassoon protein SH3D19 0.018 SH3 domain containing 19 isoform b SH3D19 0.018 SH3 domain containing 19 isoform a LOC100287250 0.018 PREDICTED: hypothetical protein XP_002344493 COL9A1 0.018 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.018 alpha 1 type IX collagen isoform 2 precursor COL1A1 0.017 alpha 1 type I collagen preproprotein GNAS 0.017 GNAS complex locus XLas LOC100292122 0.017 PREDICTED: hypothetical protein XP_002345138 LOC100286986 0.017 PREDICTED: hypothetical protein XP_002344191 SIN3A 0.017 transcriptional co-repressor Sin3A SIN3A 0.017 transcriptional co-repressor Sin3A SIN3A 0.017 transcriptional co-repressor Sin3A NFKBIE 0.017 nuclear factor of kappa light polypeptide gene enhan... LOC100289721 0.017 PREDICTED: hypothetical protein XP_002347280 GLT8D4 0.017 glycosyltransferase 8 domain containing 4 COL5A2 0.015 alpha 2 type V collagen preproprotein AHCYL2 0.015 S-adenosylhomocysteine hydrolase-like 2 isoform a [H...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
