Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SH3D19 Sequence: fasta or formatted (790aa) NCBI GI: 193083141
Description:

SH3 domain containing 19 isoform a

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [767aa] SH3 domain containing 19 isoform b
alt prot [731aa] SH3 domain containing 19 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         41           2
 C cysteine            1.3         10           1
 D aspartate           4.9         39           3
 E glutamate           7.3         58           2
 F phenylalanine       2.7         21           1
 G glycine             6.8         54           2
 H histidine           1.4         11           1
 I isoleucine          5.1         40           3
 K lysine              7.7         61           2
 L leucine             8.0         63           3
 M methionine          1.3         10           1
 N asparagine          4.7         37           2
 P proline            11.9         94           4
 Q glutamine           3.7         29           2
 R arginine            5.3         42           2
 S serine              8.9         70           3
 T threonine           4.7         37           1
 V valine              6.7         53           2
 W tryptophan          0.8          6           1
 Y tyrosine            1.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3 domain containing 19 isoform a 
SH3D19                0.962   SH3 domain containing 19 isoform b 
SH3D19                0.903   SH3 domain containing 19 isoform c 
ITSN2                 0.063   intersectin 2 isoform 3 
ITSN2                 0.063   intersectin 2 isoform 1 
ITSN2                 0.063   intersectin 2 isoform 2 
SORBS2                0.058   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.058   sorbin and SH3 domain containing 2 isoform 4 
ITSN1                 0.057   intersectin 1 isoform ITSN-s 
ITSN1                 0.057   intersectin 1 isoform ITSN-l 
SORBS1                0.057   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.054   sorbin and SH3 domain containing 1 isoform 1 
SORBS2                0.053   sorbin and SH3 domain containing 2 isoform 1 
SORBS2                0.052   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.052   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.052   sorbin and SH3 domain containing 2 isoform 5 
SORBS1                0.051   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.051   sorbin and SH3 domain containing 1 isoform 6 
SH3KBP1               0.051   SH3-domain kinase binding protein 1 isoform a 
SORBS2                0.048   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.048   sorbin and SH3 domain containing 2 isoform 2 
SORBS3                0.047   sorbin and SH3 domain containing 3 isoform 1 
C1orf113              0.047   SH3 domain-containing protein C1orf113 isoform 1 [H...
SORBS3                0.047   sorbin and SH3 domain containing 3 isoform 2 
SORBS1                0.047   sorbin and SH3 domain containing 1 isoform 5 
DNMBP                 0.046   dynamin binding protein 
CD2AP                 0.042   CD2-associated protein 
SH3RF3                0.040   SH3 domain containing ring finger 3 
SORBS1                0.038   sorbin and SH3 domain containing 1 isoform 4 
SORBS1                0.037   sorbin and SH3 domain containing 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press