TDRKH 4087

Name: TDRKH	Sequence: fasta or formatted (561aa)		NCBI GI: 145312270
Description: tudor and KH domain containing isoform a		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [516aa] tudor and KH domain containing isoform b alt mRNA [561aa] tudor and KH domain containing isoform a alt mRNA [561aa] tudor and KH domain containing isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 41 3 C cysteine 1.2 7 1 D aspartate 6.6 37 2 E glutamate 9.3 52 3 F phenylalanine 2.1 12 1 G glycine 6.4 36 3 H histidine 2.0 11 1 I isoleucine 6.6 37 2 K lysine 5.5 31 2 L leucine 9.6 54 3 M methionine 2.0 11 1 N asparagine 2.3 13 1 P proline 5.3 30 3 Q glutamine 3.4 19 1 R arginine 5.3 30 2 S serine 9.1 51 3 T threonine 6.1 34 1 V valine 6.1 34 3 W tryptophan 1.4 8 1 Y tyrosine 2.3 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tudor and KH domain containing isoform a TDRKH 1.000 tudor and KH domain containing isoform a TDRKH 1.000 tudor and KH domain containing isoform a TDRKH 0.774 tudor and KH domain containing isoform b TDRD1 0.059 tudor domain containing 1 TDRD5 0.054 tudor domain containing 5 TDRD7 0.052 tudor domain containing 7 FUBP3 0.045 far upstream element (FUSE) binding protein 3 [Homo... FUBP1 0.044 far upstream element-binding protein NOVA1 0.043 neuro-oncological ventral antigen 1 isoform 2 NOVA2 0.042 neuro-oncological ventral antigen 2 RNF17 0.041 ring finger protein 17 KHSRP 0.038 KH-type splicing regulatory protein TDRD6 0.037 tudor domain containing 6 AKAP1 0.036 A-kinase anchor protein 1 precursor NOVA1 0.035 neuro-oncological ventral antigen 1 isoform 1 IGF2BP2 0.033 insulin-like growth factor 2 mRNA binding protein 2 ... IGF2BP2 0.033 insulin-like growth factor 2 mRNA binding protein 2 ... IGF2BP3 0.033 insulin-like growth factor 2 mRNA binding protein 3 ... LOC100129278 0.032 PREDICTED: similar to tudor domain containing 1 [Ho... LOC100129278 0.032 PREDICTED: similar to tudor domain containing 1 [Ho... LOC100129278 0.032 PREDICTED: similar to tudor domain containing 1 [Ho... IGF2BP1 0.031 insulin-like growth factor 2 mRNA binding protein 1... IGF2BP1 0.031 insulin-like growth factor 2 mRNA binding protein 1 ... PCBP3 0.030 poly(rC) binding protein 3 isoform 2 PCBP3 0.030 poly(rC) binding protein 3 isoform 1 TDRD9 0.029 tudor domain containing 9 PCBP1 0.029 poly(rC) binding protein 1 HDLBP 0.028 high density lipoprotein binding protein HDLBP 0.028 high density lipoprotein binding protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.