Guide to the Human Genome
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Name: DARC Sequence: fasta or formatted (338aa) NCBI GI: 171846251
Description:

Duffy blood group antigen isoform a

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [336aa] Duffy blood group antigen isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         37           3
 C cysteine            3.3         11           1
 D aspartate           3.0         10           2
 E glutamate           2.1          7           1
 F phenylalanine       4.4         15           2
 G glycine             9.5         32           2
 H histidine           2.4          8           1
 I isoleucine          2.7          9           1
 K lysine              1.8          6           2
 L leucine            20.7         70           4
 M methionine          1.2          4           1
 N asparagine          2.1          7           1
 P proline             5.6         19           1
 Q glutamine           3.0         10           2
 R arginine            1.8          6           1
 S serine              9.5         32           2
 T threonine           5.0         17           1
 V valine              6.2         21           2
 W tryptophan          3.3         11           2
 Y tyrosine            1.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Duffy blood group antigen isoform a 
DARC                  0.974   Duffy blood group antigen isoform b 
IL8RB                 0.044   interleukin 8 receptor beta 
CCR4                  0.041   chemokine (C-C motif) receptor 4 
CCBP2                 0.041   chemokine binding protein 2 
CCR2                  0.039   chemokine (C-C motif) receptor 2 isoform B 
CCR10                 0.039   CC chemokine receptor 10 
CCR2                  0.038   chemokine (C-C motif) receptor 2 isoform A 
CCR3                  0.036   CC chemokine receptor 3 
CCR3                  0.036   CC chemokine receptor 3 
CCR5                  0.035   chemokine (C-C motif) receptor 5 
CCR5                  0.035   chemokine (C-C motif) receptor 5 
CX3CR1                0.029   chemokine (C-X3-C motif) receptor 1 
CXCR3                 0.027   chemokine (C-X-C motif) receptor 3 isoform B 
CXCR3                 0.027   chemokine (C-X-C motif) receptor 3 isoform A 
CXCR5                 0.027   Burkitt lymphoma receptor 1 isoform 1 
CXCR5                 0.027   Burkitt lymphoma receptor 1 isoform 2 
CXCR4                 0.026   chemokine (C-X-C motif) receptor 4 isoform b 
CXCR4                 0.026   chemokine (C-X-C motif) receptor 4 isoform a 
CCR1                  0.026   chemokine (C-C motif) receptor 1 
F2RL3                 0.026   coagulation factor II (thrombin) receptor-like 3 pre...
FPR2                  0.024   formyl peptide receptor-like 1 
FPR2                  0.024   formyl peptide receptor-like 1 
CCR7                  0.021   chemokine (C-C motif) receptor 7 precursor 
XCR1                  0.020   XC chemokine receptor 1 
XCR1                  0.020   XC chemokine receptor 1 
F2RL2                 0.018   coagulation factor II (thrombin) receptor-like 2 prec...
TBXA2R                0.018   thromboxane A2 receptor 
CCR9                  0.017   chemokine (C-C motif) receptor 9 isoform B 
CCR9                  0.017   chemokine (C-C motif) receptor 9 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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