Guide to the Human Genome
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Name: TBXA2R Sequence: fasta or formatted (343aa) NCBI GI: 4507381
Description:

thromboxane A2 receptor

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         33           3
 C cysteine            2.3          8           1
 D aspartate           1.5          5           1
 E glutamate           2.9         10           2
 F phenylalanine       5.0         17           2
 G glycine             8.5         29           2
 H histidine           1.5          5           1
 I isoleucine          2.9         10           1
 K lysine              0.3          1           1
 L leucine            16.9         58           3
 M methionine          2.6          9           2
 N asparagine          1.7          6           1
 P proline             5.5         19           2
 Q glutamine           4.7         16           2
 R arginine            7.6         26           2
 S serine              8.2         28           2
 T threonine           5.5         19           2
 V valine              8.5         29           2
 W tryptophan          2.6          9           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thromboxane A2 receptor 
PTGER1                0.256   prostaglandin E receptor 1, subtype EP1 
PTGFR                 0.249   prostaglandin F receptor isoform a precursor 
PTGER3                0.234   prostaglandin E receptor 3, subtype EP3 isoform 2 [H...
PTGER3                0.232   prostaglandin E receptor 3, subtype EP3 isoform 8 [H...
PTGER3                0.231   prostaglandin E receptor 3, subtype EP3 isoform 5 [H...
PTGER3                0.231   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.231   prostaglandin E receptor 3, subtype EP3 isoform 7 [H...
PTGER3                0.231   prostaglandin E receptor 3, subtype EP3 isoform 6 [H...
PTGER3                0.231   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.231   prostaglandin E receptor 3, subtype EP3 isoform 3 [H...
PTGER3                0.231   prostaglandin E receptor 3, subtype EP3 isoform 1 [H...
PTGER3                0.231   prostaglandin E receptor 3, subtype EP3 isoform 4 [...
PTGFR                 0.185   prostaglandin F receptor isoform b precursor 
PTGIR                 0.159   prostaglandin I2 (prostacyclin) receptor (IP) 
PTGER4                0.137   prostaglandin E receptor 4, subtype EP4 
PTGER2                0.135   prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom...
PTGDR                 0.120   prostaglandin D2 receptor 
UTS2R                 0.053   urotensin 2 receptor 
OPN4                  0.052   opsin 4 isoform 1 
OPN4                  0.049   opsin 4 isoform 2 
GPR3                  0.046   G protein-coupled receptor 3 
SSTR2                 0.044   somatostatin receptor 2 
GPER                  0.044   G protein-coupled receptor 30 
GPER                  0.044   G protein-coupled receptor 30 
GPER                  0.044   G protein-coupled receptor 30 
ADRA1D                0.042   alpha-1D-adrenergic receptor 
TSHR                  0.041   thyroid stimulating hormone receptor isoform 1 precu...
P2RY11                0.041   purinergic receptor P2Y11 
PPAN-P2RY11           0.041   PPAN-P2RY11 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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