ATXN2L 24286

Name: ATXN2L	Sequence: fasta or formatted (1044aa)		NCBI GI: 27262651
Description: ataxin 2 related protein isoform D		Referenced in: Cerebellum
Other entries for this name: alt prot [1062aa] ataxin 2 related protein isoform B alt prot [1075aa] ataxin 2 related protein isoform A alt prot [1097aa] ataxin 2 related protein isoform C alt prot [1044aa] ataxin 2 related protein isoform E
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 89 5 C cysteine 0.5 5 1 D aspartate 2.7 28 2 E glutamate 5.0 52 3 F phenylalanine 2.0 21 1 G glycine 8.6 90 2 H histidine 3.3 34 2 I isoleucine 2.5 26 1 K lysine 4.2 44 2 L leucine 5.7 60 2 M methionine 2.1 22 2 N asparagine 2.9 30 2 P proline 16.0 167 4 Q glutamine 7.7 80 2 R arginine 4.3 45 2 S serine 11.3 118 3 T threonine 4.9 51 2 V valine 5.1 53 2 W tryptophan 0.2 2 1 Y tyrosine 2.6 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxin 2 related protein isoform D ATXN2L 0.984 ataxin 2 related protein isoform E ATXN2L 0.983 ataxin 2 related protein isoform B ATXN2L 0.983 ataxin 2 related protein isoform C ATXN2L 0.983 ataxin 2 related protein isoform A ATXN2 0.281 ataxin 2 NACA 0.038 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.035 PREDICTED: hypothetical protein FLJ22184 MLL2 0.034 myeloid/lymphoid or mixed-lineage leukemia 2 FLJ22184 0.032 PREDICTED: hypothetical protein LOC80164 FLJ22184 0.029 PREDICTED: hypothetical protein FLJ22184 RERE 0.028 atrophin-1 like protein isoform a RERE 0.028 atrophin-1 like protein isoform a RERE 0.027 atrophin-1 like protein isoform b PRB2 0.025 proline-rich protein BstNI subfamily 2 ATN1 0.025 atrophin-1 ATN1 0.025 atrophin-1 PCLO 0.024 piccolo isoform 2 PCLO 0.024 piccolo isoform 1 WNK2 0.024 WNK lysine deficient protein kinase 2 KIAA1522 0.022 hypothetical protein LOC57648 PRG4 0.022 proteoglycan 4 isoform D PRG4 0.022 proteoglycan 4 isoform C PRG4 0.022 proteoglycan 4 isoform B PRG4 0.022 proteoglycan 4 isoform A MLL5 0.021 myeloid/lymphoid or mixed-lineage leukemia 5 MLL5 0.021 myeloid/lymphoid or mixed-lineage leukemia 5 POLR2A 0.021 DNA-directed RNA polymerase II A MDC1 0.021 mediator of DNA-damage checkpoint 1 MUC6 0.020 mucin 6, gastric Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.