Guide to the Human Genome
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Name: CD226 Sequence: fasta or formatted (336aa) NCBI GI: 171460997
Description:

CD226 molecule precursor

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         15           2
 C cysteine            2.1          7           1
 D aspartate           4.2         14           2
 E glutamate           4.8         16           2
 F phenylalanine       4.5         15           2
 G glycine             3.9         13           2
 H histidine           1.8          6           1
 I isoleucine          5.7         19           2
 K lysine              2.7          9           1
 L leucine             7.7         26           4
 M methionine          2.7          9           1
 N asparagine          5.1         17           2
 P proline             5.4         18           1
 Q glutamine           5.4         18           2
 R arginine            6.8         23           5
 S serine              8.6         29           1
 T threonine           8.6         29           2
 V valine              8.9         30           2
 W tryptophan          2.1          7           1
 Y tyrosine            4.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD226 molecule precursor 
PVRL3                 0.056   poliovirus receptor-related 3 
CD96                  0.044   CD96 antigen isoform 1 precursor 
CD96                  0.044   CD96 antigen isoform 2 precursor 
PVRL1                 0.033   poliovirus receptor-related 1 isoform 3 
PVRL1                 0.033   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.033   poliovirus receptor-related 1 isoform 1 
ESAM                  0.027   endothelial cell adhesion molecule 
CEACAM8               0.027   carcinoembryonic antigen-related cell adhesion molec...
CXADR                 0.026   coxsackie virus and adenovirus receptor precursor [Ho...
HAPLN2                0.026   brain link protein-1 
SCN4B                 0.024   sodium channel, voltage-gated, type IV, beta isoform...
SCN4B                 0.024   sodium channel, voltage-gated, type IV, beta isofor...
ASAM                  0.024   adipocyte-specific adhesion molecule 
PVRL4                 0.023   poliovirus receptor-related 4 
CEACAM5               0.023   carcinoembryonic antigen-related cell adhesion molec...
IL18R1                0.021   interleukin 18 receptor 1 precursor 
BSG                   0.020   basigin isoform 1 precursor 
BSG                   0.020   basigin isoform 2 precursor 
CEACAM6               0.020   carcinoembryonic antigen-related cell adhesion molec...
IL1RAPL1              0.020   interleukin 1 receptor accessory protein-like 1 precu...
MXRA5                 0.018   adlican 
IGSF11                0.018   immunoglobulin superfamily, member 11 isoform b [Hom...
IGSF11                0.018   immunoglobulin superfamily, member 11 isoform a [Hom...
VSIG8                 0.018   V-set and immunoglobulin domain containing 8 
BSG                   0.018   basigin isoform 4 
IGSF1                 0.018   immunoglobulin superfamily, member 1 isoform 1 [Homo...
BTN2A2                0.017   butyrophilin, subfamily 2, member A2 isoform a 
PVR                   0.015   poliovirus receptor isoform delta 
PVR                   0.015   poliovirus receptor isoform gamma 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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