SCN4B 13289

Name: SCN4B	Sequence: fasta or formatted (118aa)		NCBI GI: 215272334
Description: sodium channel, voltage-gated, type IV, beta isoform 3		Referenced in: Sodium Channels
Other entries for this name: alt prot [94aa] sodium channel, voltage-gated, type IV, beta isoform 2 alt prot [228aa] sodium channel, voltage-gated, type IV, beta isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.5 3 1 C cysteine 1.7 2 1 D aspartate 4.2 5 1 E glutamate 7.6 9 2 F phenylalanine 2.5 3 1 G glycine 5.9 7 2 H histidine 2.5 3 2 I isoleucine 10.2 12 2 K lysine 11.0 13 3 L leucine 13.6 16 2 M methionine 0.8 1 1 N asparagine 7.6 9 2 P proline 3.4 4 2 Q glutamine 1.7 2 1 R arginine 2.5 3 1 S serine 5.9 7 3 T threonine 5.9 7 1 V valine 9.3 11 2 W tryptophan 0.0 0 0 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type IV, beta isofor... SCN4B 1.000 sodium channel, voltage-gated, type IV, beta isoform... SCN4B 0.560 sodium channel, voltage-gated, type IV, beta isofor... SCN2B 0.150 sodium channel, voltage-gated, type II, beta MPZ 0.116 myelin protein zero MPZL1 0.082 myelin protein zero-like 1 isoform a CD226 0.077 CD226 molecule precursor MPZL1 0.058 myelin protein zero-like 1 isoform b CADM4 0.058 cell adhesion molecule 4 FGFR1 0.058 fibroblast growth factor receptor 1 isoform 9 precur... FGFR1 0.058 fibroblast growth factor receptor 1 isoform 4 precur... FGFR1 0.058 fibroblast growth factor receptor 1 isoform 3 precur... FGFR1 0.058 fibroblast growth factor receptor 1 isoform 2 precur... FGFR1 0.058 fibroblast growth factor receptor 1 isoform 1 precu... AMICA1 0.058 adhesion molecule, interacts with CXADR antigen 1 i... AMICA1 0.058 adhesion molecule, interacts with CXADR antigen 1 i... MPZL2 0.053 myelin protein zero-like 2 precursor MPZL2 0.053 myelin protein zero-like 2 precursor LRIG3 0.043 leucine-rich repeats and immunoglobulin-like domains... LRIG3 0.043 leucine-rich repeats and immunoglobulin-like domain... C10orf54 0.043 platelet receptor Gi24 IL1RAPL2 0.043 interleukin 1 receptor accessory protein-like 2 [Hom... FGFR2 0.039 fibroblast growth factor receptor 2 isoform 4 precu... IL1RAPL1 0.039 interleukin 1 receptor accessory protein-like 1 precu... F11R 0.039 F11 receptor precursor CADM1 0.034 immunoglobulin superfamily, member 4D isoform 2 [Ho... IGSF1 0.034 immunoglobulin superfamily, member 1 isoform 1 [Homo... MOG 0.034 myelin oligodendrocyte glycoprotein isoform beta5 pr... MOG 0.034 myelin oligodendrocyte glycoprotein isoform beta2 pr... MOG 0.034 myelin oligodendrocyte glycoprotein isoform alpha3 p... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.