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Search of human proteins with 170763486
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170763486 hypothetical protein LOC55322 [Homo sapiens]
(442 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170763486 hypothetical protein LOC55322 [Homo sapiens] 902 0.0
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 37 0.036
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 37 0.036
gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens] 33 0.68
gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens] 33 0.68
gi|9966805 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens] 33 0.68
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 32 0.88
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 32 0.88
gi|55741677 SET domain containing 1A [Homo sapiens] 32 1.2
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa... 32 1.2
gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens] 32 1.2
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi... 32 1.2
gi|109255232 centrosomal protein 170kDa isoform gamma [Homo sapi... 32 1.2
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 32 1.5
gi|148612801 KIAA1009 protein [Homo sapiens] 32 1.5
gi|19913408 DNA topoisomerase II, beta isozyme [Homo sapiens] 31 2.0
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 31 2.6
gi|4557365 Bloom syndrome protein [Homo sapiens] 30 3.4
gi|88900507 protein arginine methyltransferase 5 isoform b [Homo... 30 4.4
gi|20070220 protein arginine methyltransferase 5 isoform a [Homo... 30 4.4
gi|217330641 IWS1 homolog [Homo sapiens] 30 4.4
gi|157738687 WEE1 homolog 2 [Homo sapiens] 30 4.4
gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens] 30 5.7
gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens] 30 5.7
gi|4557841 recombination activating gene 1 [Homo sapiens] 29 7.5
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 29 7.5
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 29 7.5
gi|21735569 claspin [Homo sapiens] 29 9.8
gi|161016767 mucin 21 [Homo sapiens] 29 9.8
gi|7019327 anaphase-promoting complex subunit 2 [Homo sapiens] 29 9.8
>gi|170763486 hypothetical protein LOC55322 [Homo sapiens]
Length = 442
Score = 902 bits (2331), Expect = 0.0
Identities = 442/442 (100%), Positives = 442/442 (100%)
Query: 1 MSDSAGGRAGLRRYPKLPVWVVEDHQEVLPFIYRAIGSKHLPASNVSFLHFDSHPDLLIP 60
MSDSAGGRAGLRRYPKLPVWVVEDHQEVLPFIYRAIGSKHLPASNVSFLHFDSHPDLLIP
Sbjct: 1 MSDSAGGRAGLRRYPKLPVWVVEDHQEVLPFIYRAIGSKHLPASNVSFLHFDSHPDLLIP 60
Query: 61 VNMPADTVFDKETLFGELSIENWIMPAVYAGHFSHVIWFHPTWAQQIREGRHHFLVGKDT 120
VNMPADTVFDKETLFGELSIENWIMPAVYAGHFSHVIWFHPTWAQQIREGRHHFLVGKDT
Sbjct: 61 VNMPADTVFDKETLFGELSIENWIMPAVYAGHFSHVIWFHPTWAQQIREGRHHFLVGKDT 120
Query: 121 STTTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQEENDAVSSAKKP 180
STTTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQEENDAVSSAKKP
Sbjct: 121 STTTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQEENDAVSSAKKP 180
Query: 181 KLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQECQTAASTGEILE 240
KLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQECQTAASTGEILE
Sbjct: 181 KLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQECQTAASTGEILE 240
Query: 241 ILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKILQELYQFKKPGTNLTEEDLVDIVDTR 300
ILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKILQELYQFKKPGTNLTEEDLVDIVDTR
Sbjct: 241 ILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKILQELYQFKKPGTNLTEEDLVDIVDTR 300
Query: 301 IHQLEDLEATFADLCDGDDEETVQRWASNPGMESLVPLVQSLKKRMEVPDYEMVHQAGLT 360
IHQLEDLEATFADLCDGDDEETVQRWASNPGMESLVPLVQSLKKRMEVPDYEMVHQAGLT
Sbjct: 301 IHQLEDLEATFADLCDGDDEETVQRWASNPGMESLVPLVQSLKKRMEVPDYEMVHQAGLT 360
Query: 361 CDYSELPHHISTEQEIECLIQSVHYLLKNLPNPTLVTIARSSLDDYCPSDQVDTIQEKVL 420
CDYSELPHHISTEQEIECLIQSVHYLLKNLPNPTLVTIARSSLDDYCPSDQVDTIQEKVL
Sbjct: 361 CDYSELPHHISTEQEIECLIQSVHYLLKNLPNPTLVTIARSSLDDYCPSDQVDTIQEKVL 420
Query: 421 NMLRALYGNLDLQVYAAESPPS 442
NMLRALYGNLDLQVYAAESPPS
Sbjct: 421 NMLRALYGNLDLQVYAAESPPS 442
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 37.0 bits (84), Expect = 0.036
Identities = 72/309 (23%), Positives = 115/309 (37%), Gaps = 43/309 (13%)
Query: 105 QQIREGRHHFL--VGKDTSTTTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPY 162
+ +R+G H VG + V L G++ ED + K M++P
Sbjct: 1817 EAVRDGGQHARDPVGGSVEFQFVPVLKLVSTLLVMGIFGDEDVKQILK-------MIEPE 1869
Query: 163 KLCNNQEENDAVSSAKKP--KLALEDSENTASTNCDSSSE-----------GLEKDTATQ 209
+EE D ++ + ED E TA D E GLE+
Sbjct: 1870 VFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEEGLLQM 1929
Query: 210 RSDQTC-------LEPSCSCSSENQECQTAASTGEILEILKKGKAFVLDIDLDFFSVKNP 262
+ ++ LE C +++ AA ++ L+ + + + FS+
Sbjct: 1930 KLPESVKLQMCHLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGLLIKAFSMTAA 1989
Query: 263 FKEMFTQEEYKILQE----LYQFKKPGTN-----LTEEDLVDIVDTRIHQLEDLEATFAD 313
T+E QE L QFK GT+ L EE D++D HQ DL A
Sbjct: 1990 ETARRTREFRSPPQEQINMLLQFKD-GTDEEDCPLPEEIRQDLLD--FHQ--DLLAHCGI 2044
Query: 314 LCDGDDEETVQRWASNPGMESLVPLVQSLKKRMEVPDYEMVHQAGLTCDYSELPHHISTE 373
DG++EE + + SL+ V+ +KK+ E P+ E + EL H+
Sbjct: 2045 QLDGEEEEPEEETTLGSRLMSLLEKVRLVKKKEEKPEEERSAEESKPRSLQELVSHMVVR 2104
Query: 374 QEIECLIQS 382
E +QS
Sbjct: 2105 WAQEDFVQS 2113
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 37.0 bits (84), Expect = 0.036
Identities = 72/309 (23%), Positives = 115/309 (37%), Gaps = 43/309 (13%)
Query: 105 QQIREGRHHFL--VGKDTSTTTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPY 162
+ +R+G H VG + V L G++ ED + K M++P
Sbjct: 1817 EAVRDGGQHARDPVGGSVEFQFVPVLKLVSTLLVMGIFGDEDVKQILK-------MIEPE 1869
Query: 163 KLCNNQEENDAVSSAKKP--KLALEDSENTASTNCDSSSE-----------GLEKDTATQ 209
+EE D ++ + ED E TA D E GLE+
Sbjct: 1870 VFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEEGLLQM 1929
Query: 210 RSDQTC-------LEPSCSCSSENQECQTAASTGEILEILKKGKAFVLDIDLDFFSVKNP 262
+ ++ LE C +++ AA ++ L+ + + + FS+
Sbjct: 1930 KLPESVKLQMCHLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGLLIKAFSMTAA 1989
Query: 263 FKEMFTQEEYKILQE----LYQFKKPGTN-----LTEEDLVDIVDTRIHQLEDLEATFAD 313
T+E QE L QFK GT+ L EE D++D HQ DL A
Sbjct: 1990 ETARRTREFRSPPQEQINMLLQFKD-GTDEEDCPLPEEIRQDLLD--FHQ--DLLAHCGI 2044
Query: 314 LCDGDDEETVQRWASNPGMESLVPLVQSLKKRMEVPDYEMVHQAGLTCDYSELPHHISTE 373
DG++EE + + SL+ V+ +KK+ E P+ E + EL H+
Sbjct: 2045 QLDGEEEEPEEETTLGSRLMSLLEKVRLVKKKEEKPEEERSAEESKPRSLQELVSHMVVR 2104
Query: 374 QEIECLIQS 382
E +QS
Sbjct: 2105 WAQEDFVQS 2113
>gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]
Length = 1251
Score = 32.7 bits (73), Expect = 0.68
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 142 PEDQLENQKPLQLDVIMVKPYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEG 201
P++ N L+ D+ KL +++EEN+ ++ + AL DS NC +S
Sbjct: 381 PDNGTSNTSMLEDDL------KLSSDEEENEQQAAQRTALRALSDSAVVQQPNCRTSVPS 434
Query: 202 LEKDTATQRSDQTCLEPSCSCSSENQECQTAASTGE 237
K +++ S + S S SS + +T +S+ E
Sbjct: 435 -SKGSSSSSSSGSSSSSSDSESSSGSDSETESSSSE 469
>gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]
Length = 1226
Score = 32.7 bits (73), Expect = 0.68
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 142 PEDQLENQKPLQLDVIMVKPYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEG 201
P++ N L+ D+ KL +++EEN+ ++ + AL DS NC +S
Sbjct: 356 PDNGTSNTSMLEDDL------KLSSDEEENEQQAAQRTALRALSDSAVVQQPNCRTSVPS 409
Query: 202 LEKDTATQRSDQTCLEPSCSCSSENQECQTAASTGE 237
K +++ S + S S SS + +T +S+ E
Sbjct: 410 -SKGSSSSSSSGSSSSSSDSESSSGSDSETESSSSE 444
>gi|9966805 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
Length = 859
Score = 32.7 bits (73), Expect = 0.68
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 160 KPYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKD--TATQRSDQTCLE 217
K + +EE + SS+ K K+ L+ S+N A+ + E KD Q D C +
Sbjct: 77 KAQAVSEEEEEEEGKSSSPKKKIKLKKSKNVATEGTSTQKEFEVKDPELEAQGDDMVCDD 136
Query: 218 PSCSCSSENQECQTA 232
P + QTA
Sbjct: 137 PEAGEMTSENLVQTA 151
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 32.3 bits (72), Expect = 0.88
Identities = 66/286 (23%), Positives = 114/286 (39%), Gaps = 45/286 (15%)
Query: 166 NNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSE 225
N QE + + K K LEDS+N S + L ++ QR + T ++ S E
Sbjct: 860 NYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHLQRINPTTVKMKSSVFDE 919
Query: 226 NQECQTAA---------STGEILEILKKGKAFVLDIDLDFFSVKNPFKE-----MFTQEE 271
++ T E++E L+ K L++ + K+ F EE
Sbjct: 920 DKTFVAETLEMGEVVEKDTTELMEKLEVTKREKLELSQRLSDLSEQLKQKHGEISFLNEE 979
Query: 272 YKILQELYQFKKPGTNLTEEDLVDIVD-TRIHQLEDLEATFADLCDGDDEETVQRWASNP 330
K L++ +K +L +L I++ R ++ + + L DG V S
Sbjct: 980 VKSLKQ----EKEQVSLRCRELEIIINHNRAENVQSCDTQVSSLLDG-----VVTMTSRG 1030
Query: 331 GMESLVPLVQSLKKRMEVPDYEMVHQAGLTCDYSELPHHISTEQEIECLIQSVHYLLKNL 390
S+ + +S + ++ + V +T + E + E LI L +L
Sbjct: 1031 AEGSVSKVNKSFGEESKIMVEDKVSFENMT---------VGEESKQEQLI------LDHL 1075
Query: 391 PNPTLVTIARSSLDDYCPSDQVDTIQEKVLNMLRALYGNLDLQVYA 436
P+ T SSL PS+ D +Q K LN+L++ +L LQ+ A
Sbjct: 1076 PSVT----KESSLRATQPSEN-DKLQ-KELNVLKSEQNDLRLQMEA 1115
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 32.3 bits (72), Expect = 0.88
Identities = 66/286 (23%), Positives = 114/286 (39%), Gaps = 45/286 (15%)
Query: 166 NNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSE 225
N QE + + K K LEDS+N S + L ++ QR + T ++ S E
Sbjct: 860 NYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHLQRINPTTVKMKSSVFDE 919
Query: 226 NQECQTAA---------STGEILEILKKGKAFVLDIDLDFFSVKNPFKE-----MFTQEE 271
++ T E++E L+ K L++ + K+ F EE
Sbjct: 920 DKTFVAETLEMGEVVEKDTTELMEKLEVTKREKLELSQRLSDLSEQLKQKHGEISFLNEE 979
Query: 272 YKILQELYQFKKPGTNLTEEDLVDIVD-TRIHQLEDLEATFADLCDGDDEETVQRWASNP 330
K L++ +K +L +L I++ R ++ + + L DG V S
Sbjct: 980 VKSLKQ----EKEQVSLRCRELEIIINHNRAENVQSCDTQVSSLLDG-----VVTMTSRG 1030
Query: 331 GMESLVPLVQSLKKRMEVPDYEMVHQAGLTCDYSELPHHISTEQEIECLIQSVHYLLKNL 390
S+ + +S + ++ + V +T + E + E LI L +L
Sbjct: 1031 AEGSVSKVNKSFGEESKIMVEDKVSFENMT---------VGEESKQEQLI------LDHL 1075
Query: 391 PNPTLVTIARSSLDDYCPSDQVDTIQEKVLNMLRALYGNLDLQVYA 436
P+ T SSL PS+ D +Q K LN+L++ +L LQ+ A
Sbjct: 1076 PSVT----KESSLRATQPSEN-DKLQ-KELNVLKSEQNDLRLQMEA 1115
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 32.0 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 169 EENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQE 228
E+ ++ SS+K A D EN ++++ +SSS +++ S + S SSE++E
Sbjct: 1007 EDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEE 1066
>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
sapiens]
Length = 641
Score = 32.0 bits (71), Expect = 1.2
Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 174 VSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQEC--QT 231
+ A+K ++ ED + C S S+ L+K + + LE E ++ +
Sbjct: 438 LQQAEKAQMEAEDEDEKYLQECLSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQED 497
Query: 232 AASTGEILEILKKGKAFVLDIDLDFFSVKNPFKEM--FTQEEYKILQELYQFKKPGTNLT 289
+ L L+ ++ + +F ++++ +++ E+ + LQEL G L+
Sbjct: 498 LQKEKDALSHLRNETQQIISLKKEFLNLQDENQQLKKIYHEQEQALQEL------GNKLS 551
Query: 290 EEDL--VDIVDTR-----IHQLEDLEATFADLCD 316
E L DI + + L+D EAT LC+
Sbjct: 552 ESKLKIEDIKEANKALQGLVWLKDKEATHCKLCE 585
>gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens]
Length = 1486
Score = 32.0 bits (71), Expect = 1.2
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 22/185 (11%)
Query: 116 VGKDTSTT--TIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQEEN-- 171
+ K TS+T ++ +TS P+ ++ L+ D V + +E+N
Sbjct: 758 INKQTSSTPSSLALTSASRIRERSESLDPDSSMDTTLILK-DTEAVMAFLEAKLREDNKT 816
Query: 172 ----DAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQ 227
D S + ++ E +TAST + E K T ++S + + CS S ++
Sbjct: 817 DEGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSFTSLYKDRCSTGSPSK 876
Query: 228 ECQTAASTGEILEILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKILQELYQFKKPGTN 287
+ ++S+G ++ KK K+ D+ + K +Q + ++P +
Sbjct: 877 DVTKSSSSGAREKMEKKTKSRSTDVG-------------SRADGRKFVQSSGRIRQPSVD 923
Query: 288 LTEED 292
LT++D
Sbjct: 924 LTDDD 928
>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapiens]
Length = 1584
Score = 32.0 bits (71), Expect = 1.2
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 22/185 (11%)
Query: 116 VGKDTSTT--TIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQEEN-- 171
+ K TS+T ++ +TS P+ ++ L+ D V + +E+N
Sbjct: 856 INKQTSSTPSSLALTSASRIRERSESLDPDSSMDTTLILK-DTEAVMAFLEAKLREDNKT 914
Query: 172 ----DAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQ 227
D S + ++ E +TAST + E K T ++S + + CS S ++
Sbjct: 915 DEGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSFTSLYKDRCSTGSPSK 974
Query: 228 ECQTAASTGEILEILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKILQELYQFKKPGTN 287
+ ++S+G ++ KK K+ D+ + K +Q + ++P +
Sbjct: 975 DVTKSSSSGAREKMEKKTKSRSTDVG-------------SRADGRKFVQSSGRIRQPSVD 1021
Query: 288 LTEED 292
LT++D
Sbjct: 1022 LTDDD 1026
>gi|109255232 centrosomal protein 170kDa isoform gamma [Homo
sapiens]
Length = 1460
Score = 32.0 bits (71), Expect = 1.2
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 22/185 (11%)
Query: 116 VGKDTSTT--TIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQEEN-- 171
+ K TS+T ++ +TS P+ ++ L+ D V + +E+N
Sbjct: 758 INKQTSSTPSSLALTSASRIRERSESLDPDSSMDTTLILK-DTEAVMAFLEAKLREDNKT 816
Query: 172 ----DAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQ 227
D S + ++ E +TAST + E K T ++S + + CS S ++
Sbjct: 817 DEGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSFTSLYKDRCSTGSPSK 876
Query: 228 ECQTAASTGEILEILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKILQELYQFKKPGTN 287
+ ++S+G ++ KK K+ D+ + K +Q + ++P +
Sbjct: 877 DVTKSSSSGAREKMEKKTKSRSTDVG-------------SRADGRKFVQSSGRIRQPSVD 923
Query: 288 LTEED 292
LT++D
Sbjct: 924 LTDDD 928
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 31.6 bits (70), Expect = 1.5
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 145 QLENQKPLQLDVIMVKPYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSE-GLE 203
++ Q P QL ++ Y++ ++ E N +SS ++P++ + S + D S++ G+E
Sbjct: 691 RIAQQLPRQLQMVTEDEYEVSSDPEANIVISSCEEPRMQVTISVTSPLMREDPSTDPGVE 750
Query: 204 K---DTATQRSDQTCLE 217
+ D S + CLE
Sbjct: 751 EPQADAGDVLSPKKCLE 767
>gi|148612801 KIAA1009 protein [Homo sapiens]
Length = 1403
Score = 31.6 bits (70), Expect = 1.5
Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 289 TEEDLVDIVDTRIHQLEDLEATFADLCDGDDEETVQRWASNPGMESLVPLVQSLKKRMEV 348
T+E L+ +++++L+ + + + EE +Q+ + L++ L++ E
Sbjct: 1255 TQEVLIRHFQSQVNELQSKQESL--VVSEVREEILQK--------EITKLLEELREAKEN 1304
Query: 349 PDYEMVHQAGLTCDYSELP-HHISTEQEIECLIQSVHYLLKNLPNPTLVTIARSSLDDYC 407
EM H GL ++ H EQE++ +IQ H +++ N + R +
Sbjct: 1305 HTPEMKHFVGLEKKIKQMEMRHAQREQELQQIIQQTHQVVETEQNKEVEKWKRLAQLKNR 1364
Query: 408 PSDQVDTIQEKVLNMLRALY 427
++ T + +L++LR L+
Sbjct: 1365 ELEKFRTELDSILDVLRELH 1384
>gi|19913408 DNA topoisomerase II, beta isozyme [Homo sapiens]
Length = 1621
Score = 31.2 bits (69), Expect = 2.0
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 5/137 (3%)
Query: 161 PYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSE-GLEKDTATQRSDQTCLEPS 219
P K ++ + + KPK A + + + N DS SE G+ K T T + +
Sbjct: 1483 PSKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGRGAKKR 1542
Query: 220 CSCSSENQ-ECQTAASTGEILEILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKILQEL 278
+ SEN+ + T + K +F D D+D F P + + +E+
Sbjct: 1543 KASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVDIFPSDFPTEPPSLPRTGRARKEV 1602
Query: 279 YQFKKPGTNLTEEDLVD 295
F + EED VD
Sbjct: 1603 KYFAESD---EEEDDVD 1616
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 30.8 bits (68), Expect = 2.6
Identities = 44/214 (20%), Positives = 84/214 (39%), Gaps = 27/214 (12%)
Query: 109 EGRHHFLVGKDTSTTTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQ 168
+ + L+ + + T R +H + + Q N+ QLD + K L + Q
Sbjct: 645 KAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDKQQELNKITTQLDQVTAK---LQDKQ 701
Query: 169 EENDAVSSA----KKPKLALEDSENTA----------STNCDSSSEGLEKDTATQRSDQT 214
E + S K+ L+LE S +S E +D QR T
Sbjct: 702 EHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEADSLEVKASKEQALQDLQQQRQLNT 761
Query: 215 CLEPSCSCSSENQECQTAASTGEILEILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKI 274
LE + S+ E + + L++ KK +A S+K + +EE +I
Sbjct: 762 DLELRATELSKQLEMEKEIVSSTRLDLQKKSEALE--------SIKQKLTKQ--EEEKQI 811
Query: 275 LQELYQFKKPGTNLTEEDLVDIVDTRIHQLEDLE 308
L++ ++ T + E+L + + T + +L+ ++
Sbjct: 812 LKQDFETLSQETKIQHEELNNRIQTTVTELQKVK 845
>gi|4557365 Bloom syndrome protein [Homo sapiens]
Length = 1417
Score = 30.4 bits (67), Expect = 3.4
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 49 LHFDSHPDLLIPVNMPADTVFDKETLFGELSIENWIMPAVYAGHFSHVIWFHPTWAQQIR 108
L F S PD L +N D + D +T E S ++++ P HF V + AQ+ +
Sbjct: 139 LEFSSSPDSLSTIN-DWDDMDDFDT--SETS-KSFVTPP--QSHFVRV-----STAQKSK 187
Query: 109 EGRHHFLVGKDTSTTTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQ 168
+G+ +F + +T T++ S+ + + E+Q ++ + L DVI + +
Sbjct: 188 KGKRNFFKAQLYTTNTVKTDLPPPSSESEQIDLTEEQKDDSEWLSSDVICIDDGPIAEVH 247
Query: 169 EENDAVSSAKKPKLALEDSENTA 191
DA S K LED + +
Sbjct: 248 INEDAQES-DSLKTHLEDERDNS 269
>gi|88900507 protein arginine methyltransferase 5 isoform b [Homo
sapiens]
Length = 620
Score = 30.0 bits (66), Expect = 4.4
Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 316 DGDDEETVQRWASNPGMESLVPLVQSLKKRMEVPDYEMVHQA------GLTCDYSELPHH 369
D + RW P +++P L + P +HQ L + +
Sbjct: 194 DLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTN 253
Query: 370 ISTEQEIECLIQSVHYLLKNLPNPTLVTIARSSLDDYCPSDQVDTIQEKVLNMLRALYGN 429
+E+E +Q + YL +N P P + +DY S L+ L N
Sbjct: 254 HHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSP------------LQPLMDN 301
Query: 430 LDLQVY 435
L+ Q Y
Sbjct: 302 LESQTY 307
>gi|20070220 protein arginine methyltransferase 5 isoform a [Homo
sapiens]
Length = 637
Score = 30.0 bits (66), Expect = 4.4
Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 316 DGDDEETVQRWASNPGMESLVPLVQSLKKRMEVPDYEMVHQA------GLTCDYSELPHH 369
D + RW P +++P L + P +HQ L + +
Sbjct: 211 DLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTN 270
Query: 370 ISTEQEIECLIQSVHYLLKNLPNPTLVTIARSSLDDYCPSDQVDTIQEKVLNMLRALYGN 429
+E+E +Q + YL +N P P + +DY S L+ L N
Sbjct: 271 HHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSP------------LQPLMDN 318
Query: 430 LDLQVY 435
L+ Q Y
Sbjct: 319 LESQTY 324
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 30.0 bits (66), Expect = 4.4
Identities = 22/97 (22%), Positives = 39/97 (40%)
Query: 147 ENQKPLQLDVIMVKPYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDT 206
EN +PL L+ + +L ++ + +P + ++E+ DS SE K
Sbjct: 70 ENDEPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDSESEETRKLP 129
Query: 207 ATQRSDQTCLEPSCSCSSENQECQTAASTGEILEILK 243
+ ++ L S S + AS EI E+ K
Sbjct: 130 GSDSENEELLNGHASDSENEDVGKHPASDSEIEELQK 166
>gi|157738687 WEE1 homolog 2 [Homo sapiens]
Length = 567
Score = 30.0 bits (66), Expect = 4.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 75 FGELSIENWIMPAVYA----GHFSHVIWFHPTWAQ 105
F ELS EN + VYA GH HV+ ++ +WA+
Sbjct: 247 FTELSNENSALHEVYAHAVLGHHPHVVRYYSSWAE 281
>gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens]
Length = 920
Score = 29.6 bits (65), Expect = 5.7
Identities = 16/75 (21%), Positives = 32/75 (42%)
Query: 151 PLQLDVIMVKPYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQR 210
P+ + + P K + E +D+ S +K ED+EN+ S + SE E ++
Sbjct: 429 PMDIAQLPHLPEKTSESSETSDSESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRK 488
Query: 211 SDQTCLEPSCSCSSE 225
+ +C+ +
Sbjct: 489 KSGNACDNDMNCNDD 503
>gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens]
Length = 901
Score = 29.6 bits (65), Expect = 5.7
Identities = 16/75 (21%), Positives = 32/75 (42%)
Query: 151 PLQLDVIMVKPYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQR 210
P+ + + P K + E +D+ S +K ED+EN+ S + SE E ++
Sbjct: 410 PMDIAQLPHLPEKTSESSETSDSESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRK 469
Query: 211 SDQTCLEPSCSCSSE 225
+ +C+ +
Sbjct: 470 KSGNACDNDMNCNDD 484
>gi|4557841 recombination activating gene 1 [Homo sapiens]
Length = 1043
Score = 29.3 bits (64), Expect = 7.5
Identities = 48/243 (19%), Positives = 96/243 (39%), Gaps = 16/243 (6%)
Query: 131 DHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKLCNNQEENDAVSSAKK-------PKLA 183
D +S + + ED LE + LD + P+ + + + ++K P+ A
Sbjct: 563 DSALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKESCDGMGDVSEKHGSGPVVPEKA 622
Query: 184 LEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSENQECQTAASTGEILEILK 243
+ S SS+ ++ + + + C +P C ++ + +T + L I +
Sbjct: 623 VRFSFTIMKITIAHSSQNVKVFEEAKPNSELCCKPLCLMLADESDHETLTAILSPL-IAE 681
Query: 244 KGKAFVLDIDLDFFSVKNPFKEMFTQEEY--KILQELYQFKKPGTNLTEEDLVDIVD-TR 300
+ ++ L+ + FK +F Y K+++E+ + G+ + + D TR
Sbjct: 682 REAMKSSELMLELGGILRTFKFIFRGTGYDEKLVREVEGLEASGSVY----ICTLCDATR 737
Query: 301 IHQLEDLEATFADLCDGDDEETVQRWASNPGMESLVPLVQSLKKRMEVPDYEMVHQA-GL 359
+ ++L ++ E + W SNP ES+ L +K P E V L
Sbjct: 738 LEASQNLVFHSITRSHAENLERYEVWRSNPYHESVEELRDRVKGVSAKPFIETVPSIDAL 797
Query: 360 TCD 362
CD
Sbjct: 798 HCD 800
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 29.3 bits (64), Expect = 7.5
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 166 NNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSE 225
NN +++ S + K K DS+++ S+N SS+ + D++ S + S S SS+
Sbjct: 531 NNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDS-DSSDSDSSD 589
Query: 226 NQECQTAAST 235
+ + ++ S+
Sbjct: 590 SSDSDSSDSS 599
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 29.3 bits (64), Expect = 7.5
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 172 DAVSSAKKPKLALEDSENTAS---TNCDSSSEGLEKDTA------TQRSDQTCLEPSCSC 222
D + K K A+E S N+ S T+ D+SSEG+ + + DQ+ E
Sbjct: 227 DKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDDD 286
Query: 223 SSENQECQTAASTGEILEILKKGKA 247
S E Q ++ +L + KA
Sbjct: 287 SDSESEAQHKSNNQVLLHGISDPKA 311
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 28.9 bits (63), Expect = 9.8
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 186 DSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCS-----CSSENQECQTAASTGEILE 240
D+ NT N D S+G E+ T + +T P S + ++ C+ E LE
Sbjct: 349 DTANTTEMNSDHHSKGSEQTTGAENEVETNALPVVSKETQIITGSDESCRKDLVKNEELE 408
Query: 241 ILKKGK 246
I +K K
Sbjct: 409 IQEKQK 414
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 28.9 bits (63), Expect = 9.8
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 171 NDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQR-SDQTCLEPSCSCSSENQEC 229
+ S+A + + S + +TN DSS+ TAT S T E S + +SE+
Sbjct: 114 SSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTT 173
Query: 230 QTAAST 235
+ AST
Sbjct: 174 SSGAST 179
>gi|7019327 anaphase-promoting complex subunit 2 [Homo sapiens]
Length = 822
Score = 28.9 bits (63), Expect = 9.8
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 256 FFSVKNPFKEMFTQEEYKILQELYQFKKPGTNLTEEDLVDIVDTRIHQLEDLEATFADLC 315
FFS F+EM + L+ Q K+ G T+ +L +D+R + + LC
Sbjct: 162 FFSTPRTFQEMIQRLYGCFLRVYMQSKRKGEGGTDPELEGELDSRYARRRYYRLLQSPLC 221
Query: 316 DGDDEETVQRW 326
G + Q W
Sbjct: 222 AGCSSDKQQCW 232
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,512,719
Number of Sequences: 37866
Number of extensions: 784845
Number of successful extensions: 2623
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2580
Number of HSP's gapped (non-prelim): 65
length of query: 442
length of database: 18,247,518
effective HSP length: 105
effective length of query: 337
effective length of database: 14,271,588
effective search space: 4809525156
effective search space used: 4809525156
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.