BLM 29875

Name: BLM	Sequence: fasta or formatted (1417aa)		NCBI GI: 4557365
Description: Bloom syndrome protein		Referenced in: DNases, Recombination, and DNA Repair Replication Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 75 2 C cysteine 2.1 30 2 D aspartate 7.3 103 5 E glutamate 6.0 85 2 F phenylalanine 4.0 57 2 G glycine 4.3 61 3 H histidine 2.5 35 2 I isoleucine 4.8 68 2 K lysine 8.7 123 3 L leucine 8.9 126 2 M methionine 2.0 28 2 N asparagine 5.1 72 2 P proline 4.7 66 3 Q glutamine 4.2 59 3 R arginine 4.6 65 2 S serine 11.1 157 5 T threonine 6.4 90 3 V valine 5.2 74 2 W tryptophan 0.6 9 1 Y tyrosine 2.4 34 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Bloom syndrome protein RECQL 0.122 RecQ protein-like RECQL 0.122 RecQ protein-like RECQL5 0.093 RecQ protein-like 5 isoform 1 RECQL5 0.090 RecQ protein-like 5 isoform 3 RECQL5 0.090 RecQ protein-like 5 isoform 2 WRN 0.070 Werner syndrome protein LOC652522 0.070 PREDICTED: similar to Werner syndrome ATP-dependent... RECQL4 0.052 RecQ protein-like 4 DDX5 0.017 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 DDX17 0.017 DEAD box polypeptide 17 isoform 3 DDX17 0.017 DEAD box polypeptide 17 isoform 1 DDX47 0.017 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... DDX46 0.015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 DDX6 0.014 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 DDX23 0.014 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 DDX59 0.012 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 DDX41 0.012 DEAD-box protein abstrakt DDX21 0.011 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 EIF4A3 0.011 eukaryotic translation initiation factor 4A, isoform ... DDX49 0.011 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 DDX50 0.011 nucleolar protein GU2 SRRM2 0.010 splicing coactivator subunit SRm300 EIF4A2 0.010 eukaryotic translation initiation factor 4A2 DDX3X 0.010 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... DDX20 0.010 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 DDX3Y 0.010 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... DDX3Y 0.010 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... DDX39 0.010 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 EIF4A1 0.009 eukaryotic translation initiation factor 4A isoform 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.