Guide to the Human Genome
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Name: PRMT5 Sequence: fasta or formatted (637aa) NCBI GI: 20070220
Description:

protein arginine methyltransferase 5 isoform a

Referenced in:

Additional Protein Modifications
Capping and Splicing

Other entries for this name:
alt prot [620aa] protein arginine methyltransferase 5 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         42           2
 C cysteine            1.9         12           1
 D aspartate           4.7         30           2
 E glutamate           7.4         47           3
 F phenylalanine       4.9         31           1
 G glycine             5.2         33           2
 H histidine           2.8         18           2
 I isoleucine          5.2         33           2
 K lysine              4.6         29           2
 L leucine             9.6         61           3
 M methionine          2.2         14           1
 N asparagine          4.9         31           2
 P proline             6.9         44           3
 Q glutamine           4.1         26           2
 R arginine            5.7         36           2
 S serine              6.6         42           3
 T threonine           4.9         31           2
 V valine              6.4         41           2
 W tryptophan          2.2         14           2
 Y tyrosine            3.5         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein arginine methyltransferase 5 isoform a [Homo... 
PRMT5                 0.950   protein arginine methyltransferase 5 isoform b [Homo...
PRMT2                 0.022   HMT1 hnRNP methyltransferase-like 1 
PRMT2                 0.022   HMT1 hnRNP methyltransferase-like 1 
CARM1                 0.019   coactivator-associated arginine methyltransferase 1 ...
PRMT6                 0.013   protein arginine methyltransferase 6 
PRMT3                 0.010   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.010   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.010   protein arginine methyltransferase 3 isoform 1 [Homo...
PLEKHA6               0.005   phosphoinositol 3-phosphate-binding protein-3 
C5orf22               0.004   hypothetical protein LOC55322 
C10orf46              0.004   chromosome 10 open reading frame 46 
TGFBI                 0.004   transforming growth factor, beta-induced, 68kDa precu...
PRX                   0.004   periaxin isoform 1 
PRX                   0.004   periaxin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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