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Search of human proteins with 169234649
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens]
(317 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens] 646 0.0
gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens] 646 0.0
gi|19913394 smoothelin isoform c [Homo sapiens] 245 3e-65
gi|19913398 smoothelin isoform a [Homo sapiens] 233 1e-61
gi|19913396 smoothelin isoform b [Homo sapiens] 211 5e-55
gi|157738619 smoothelin-like 1 [Homo sapiens] 164 1e-40
gi|224451082 cytospin A [Homo sapiens] 97 2e-20
gi|224451080 cytospin A [Homo sapiens] 97 2e-20
gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sa... 92 8e-19
gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo sa... 92 8e-19
gi|67782321 spectrin beta isoform a [Homo sapiens] 91 1e-18
gi|67782319 spectrin beta isoform b [Homo sapiens] 91 1e-18
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens] 91 1e-18
gi|150378549 tangerin [Homo sapiens] 91 2e-18
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 89 5e-18
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens] 88 9e-18
gi|194097350 actinin, alpha 1 isoform a [Homo sapiens] 88 9e-18
gi|4501891 actinin, alpha 1 isoform b [Homo sapiens] 88 9e-18
gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo ... 88 9e-18
gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo ... 88 9e-18
gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens] 87 1e-17
gi|4557241 actinin, alpha 3 [Homo sapiens] 87 3e-17
gi|4501893 actinin, alpha 2 [Homo sapiens] 86 3e-17
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 85 1e-16
gi|12025678 actinin, alpha 4 [Homo sapiens] 83 4e-16
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 80 3e-15
gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens] 79 7e-15
gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens] 79 7e-15
gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens] 79 7e-15
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens] 79 7e-15
>gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens]
Length = 317
Score = 646 bits (1667), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS 60
MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS
Sbjct: 1 MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS 60
Query: 61 DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS 120
DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS
Sbjct: 61 DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS 120
Query: 121 KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ 180
KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ
Sbjct: 121 KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ 180
Query: 181 ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM 240
ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM
Sbjct: 181 ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM 240
Query: 241 AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM 300
AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM
Sbjct: 241 AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM 300
Query: 301 CVFTYVQSLYNHLRRFE 317
CVFTYVQSLYNHLRRFE
Sbjct: 301 CVFTYVQSLYNHLRRFE 317
>gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens]
Length = 461
Score = 646 bits (1667), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS 60
MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS
Sbjct: 145 MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS 204
Query: 61 DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS 120
DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS
Sbjct: 205 DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS 264
Query: 121 KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ 180
KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ
Sbjct: 265 KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ 324
Query: 181 ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM 240
ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM
Sbjct: 325 ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM 384
Query: 241 AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM 300
AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM
Sbjct: 385 AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM 444
Query: 301 CVFTYVQSLYNHLRRFE 317
CVFTYVQSLYNHLRRFE
Sbjct: 445 CVFTYVQSLYNHLRRFE 461
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 245 bits (626), Expect = 3e-65
Identities = 121/218 (55%), Positives = 166/218 (76%), Gaps = 5/218 (2%)
Query: 101 KNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVH-RQGERRRELVRS 159
+N S + + + + + ++SK S + + SP+ ++ + RQ E+++EL+++
Sbjct: 696 ENGSGSTMMQTKTFSSSSSSKKMGS---IFDREDQASPRAGSLAALEKRQAEKKKELMKA 752
Query: 160 QTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRS 219
Q+LP+TS +QARKA+ EK E+E AAG G RA ++RS SFGV +A+SIKQ+LL+WCR+
Sbjct: 753 QSLPKTSASQARKAMIEKLEKEGAAGS-PGGPRAAVQRSTSFGVPNANSIKQMLLDWCRA 811
Query: 220 KTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLA 279
KT GY+HVD+QNFSSSWSDGMAFCALVH+FFP+AFDY LSP R++NFE+AF+ AE L
Sbjct: 812 KTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAEMLV 871
Query: 280 NCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 317
+C L+EV+DMM+MG+KPDP CVFTYVQSLYNHLRR E
Sbjct: 872 DCVPLVEVDDMMIMGKKPDPKCVFTYVQSLYNHLRRHE 909
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 233 bits (595), Expect = 1e-61
Identities = 121/241 (50%), Positives = 167/241 (69%), Gaps = 28/241 (11%)
Query: 101 KNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVH-RQGERRRELVRS 159
+N S + + + + + ++SK S + + SP+ ++ + RQ E+++EL+++
Sbjct: 696 ENGSGSTMMQTKTFSSSSSSKKMGS---IFDREDQASPRAGSLAALEKRQAEKKKELMKA 752
Query: 160 QTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRS 219
Q+LP+TS +QARKA+ EK E+E AAG G RA ++RS SFGV +A+SIKQ+LL+WCR+
Sbjct: 753 QSLPKTSASQARKAMIEKLEKEGAAGS-PGGPRAAVQRSTSFGVPNANSIKQMLLDWCRA 811
Query: 220 KTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLA 279
KT GY+HVD+QNFSSSWSDGMAFCALVH+FFP+AFDY LSP R++NFE+AF+ AE A
Sbjct: 812 KTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHA 871
Query: 280 NCER-----------------------LIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRF 316
+C + L+EV+DMM+MG+KPDP CVFTYVQSLYNHLRR
Sbjct: 872 DCPQLLDTEDMVRLREPDWKMLVDCVPLVEVDDMMIMGKKPDPKCVFTYVQSLYNHLRRH 931
Query: 317 E 317
E
Sbjct: 932 E 932
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 211 bits (538), Expect = 5e-55
Identities = 107/214 (50%), Positives = 156/214 (72%), Gaps = 6/214 (2%)
Query: 101 KNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVH-RQGERRRELVRS 159
+N S + + + + + ++SK S + + SP+ ++ + RQ E+++EL+++
Sbjct: 696 ENGSGSTMMQTKTFSSSSSSKKMGS---IFDREDQASPRAGSLAALEKRQAEKKKELMKA 752
Query: 160 QTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRS 219
Q+LP+TS +QARKA+ EK E+E AAG G RA ++RS SFGV +A+SIKQ+LL+WCR+
Sbjct: 753 QSLPKTSASQARKAMIEKLEKEGAAGS-PGGPRAAVQRSTSFGVPNANSIKQMLLDWCRA 811
Query: 220 KTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLA 279
KT GY+HVD+QNFSSSWSDGMAFCALVH+FFP+AFDY LSP R++NFE+AF+ AE A
Sbjct: 812 KTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHA 871
Query: 280 NCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHL 313
+C +L++ EDM+ + R+PD CV+TY+Q Y L
Sbjct: 872 DCPQLLDTEDMVRL-REPDWKCVYTYIQEFYRCL 904
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 164 bits (414), Expect = 1e-40
Identities = 97/237 (40%), Positives = 135/237 (56%), Gaps = 24/237 (10%)
Query: 82 GLNPSPSEVITPWTPSPSEKNSSFTWS-----VPSSGYGAVTASKHSNSPPLVTPPQSPV 136
G+ PS E W SP+ + + + +SG + +AS+ S S +PP+SP
Sbjct: 284 GVIPSSPE---EWPESPTGEGHNLSTDGLGPDCVASGQTSPSASESSPSDVPQSPPESPS 340
Query: 137 SPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLK 196
S + + + ERR V + PR AQ RKA+ +K+ G L
Sbjct: 341 SGE-----KKEKAPERR---VSAPARPRGPRAQNRKAIVDKFG-------GAASGPTALF 385
Query: 197 RSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDY 256
R+ A+ +K +LLEWCR+ T Y+HVD+QNFSSSWS GMAFCAL+H FFPDAFDY
Sbjct: 386 RNTKAAGAAIGGVKNMLLEWCRAMTKKYEHVDIQNFSSSWSSGMAFCALIHKFFPDAFDY 445
Query: 257 NSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHL 313
L P +R+ NF LAF+ AE LA+C +L++V+DM+ + PD CV+TY+Q LY L
Sbjct: 446 AELDPAKRRHNFTLAFSTAEKLADCAQLLDVDDMVRLA-VPDSKCVYTYIQELYRSL 501
>gi|224451082 cytospin A [Homo sapiens]
Length = 1117
Score = 96.7 bits (239), Expect = 2e-20
Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 50/269 (18%)
Query: 85 PSPSEVITPWTP-SPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTP-PQSPVSPQPPA 142
P+P+ P TP SPS + P++ + +HS S P+ T P + +S + P
Sbjct: 855 PNPAAAAIPRTPLSPSPMKTP-----PAAAVSPM--QRHSISGPISTSKPLTALSDKRPN 907
Query: 143 ITQVHRQGE--RRRELVRSQTLPRTSEAQARKALF------EKWEQETAAGKGKGEA--- 191
++ Q R R +LPR ++ K L E+ +++ +A +G A
Sbjct: 908 YGEIPVQEHLLRTSSASRPASLPRVPAMESAKTLSVSRRSSEEVKRDISAQEGASPASLM 967
Query: 192 -----------------------RARLKRSQSFGVASAS-----SIKQILLEWCRSKTLG 223
R+R++ + +++ + S + LL+WC+ KT G
Sbjct: 968 AMGTTSPQLSLSSSPTASVTPTTRSRIREERKDPLSALAREYGGSKRNALLKWCQKKTEG 1027
Query: 224 YQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCER 283
YQ++D+ NFSSSW+DG+AFCAL+H++ P Y L+ +++NF LAF AE++ +
Sbjct: 1028 YQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELNSQDKRRNFMLAFQAAESV-GIKS 1086
Query: 284 LIEVEDMMVMGRKPDPMCVFTYVQSLYNH 312
+++ + MV +PD V YV ++Y +
Sbjct: 1087 TLDINE-MVRTERPDWQNVMLYVTAIYKY 1114
>gi|224451080 cytospin A [Homo sapiens]
Length = 1117
Score = 96.7 bits (239), Expect = 2e-20
Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 50/269 (18%)
Query: 85 PSPSEVITPWTP-SPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTP-PQSPVSPQPPA 142
P+P+ P TP SPS + P++ + +HS S P+ T P + +S + P
Sbjct: 855 PNPAAAAIPRTPLSPSPMKTP-----PAAAVSPM--QRHSISGPISTSKPLTALSDKRPN 907
Query: 143 ITQVHRQGE--RRRELVRSQTLPRTSEAQARKALF------EKWEQETAAGKGKGEA--- 191
++ Q R R +LPR ++ K L E+ +++ +A +G A
Sbjct: 908 YGEIPVQEHLLRTSSASRPASLPRVPAMESAKTLSVSRRSSEEVKRDISAQEGASPASLM 967
Query: 192 -----------------------RARLKRSQSFGVASAS-----SIKQILLEWCRSKTLG 223
R+R++ + +++ + S + LL+WC+ KT G
Sbjct: 968 AMGTTSPQLSLSSSPTASVTPTTRSRIREERKDPLSALAREYGGSKRNALLKWCQKKTEG 1027
Query: 224 YQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCER 283
YQ++D+ NFSSSW+DG+AFCAL+H++ P Y L+ +++NF LAF AE++ +
Sbjct: 1028 YQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELNSQDKRRNFMLAFQAAESV-GIKS 1086
Query: 284 LIEVEDMMVMGRKPDPMCVFTYVQSLYNH 312
+++ + MV +PD V YV ++Y +
Sbjct: 1087 TLDINE-MVRTERPDWQNVMLYVTAIYKY 1114
>gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo
sapiens]
Length = 987
Score = 91.7 bits (226), Expect = 8e-19
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 40/320 (12%)
Query: 15 QPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQ-PVTAITRVSDR--FSGETSAAA 71
Q G G + + +AP P P S + + P ++R S S T +
Sbjct: 683 QKELGDVQGHGRVVTSRAAPPPVDEEPESSEVDAAGRWPGVCVSRTSPTPPESATTVKSL 742
Query: 72 LSPMSAATLGGLNPSPSEVITPWTP--------------SPSEKNSSFTWSVPSSGYGAV 117
+ GG + S TP +P SP +++S+++ P+S V
Sbjct: 743 IKSFDLGRPGGAGQNISVHKTPRSPLSGIPVRTAPAAAVSPMQRHSTYSSVRPASR--GV 800
Query: 118 TASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRT-----SEAQARK 172
T + P P+S T+ + R+ ++L R + +
Sbjct: 801 TQR--------LDLPDLPLSDILKGRTETLKPDPHLRKSPSLESLSRPPSLGFGDTRLLS 852
Query: 173 ALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNF 232
A W+ ++ + + A L R S + LL+WC+ KT GY ++D+ NF
Sbjct: 853 ASTRAWKPQSKLSVERKDPLAALAREYG------GSKRNALLKWCQKKTQGYANIDITNF 906
Query: 233 SSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMV 292
SSSWSDG+AFCAL+H++ P Y L+ ++++N LAF AE++ + +E+ +M+
Sbjct: 907 SSSWSDGLAFCALLHTYLPAHIPYQELNSQEKKRNLLLAFEAAESV-GIKPSLELSEMLY 965
Query: 293 MGRKPDPMCVFTYVQSLYNH 312
R PD V YV +Y +
Sbjct: 966 TDR-PDWQSVMQYVAQIYKY 984
>gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo
sapiens]
Length = 1068
Score = 91.7 bits (226), Expect = 8e-19
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 40/320 (12%)
Query: 15 QPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQ-PVTAITRVSDR--FSGETSAAA 71
Q G G + + +AP P P S + + P ++R S S T +
Sbjct: 764 QKELGDVQGHGRVVTSRAAPPPVDEEPESSEVDAAGRWPGVCVSRTSPTPPESATTVKSL 823
Query: 72 LSPMSAATLGGLNPSPSEVITPWTP--------------SPSEKNSSFTWSVPSSGYGAV 117
+ GG + S TP +P SP +++S+++ P+S V
Sbjct: 824 IKSFDLGRPGGAGQNISVHKTPRSPLSGIPVRTAPAAAVSPMQRHSTYSSVRPASR--GV 881
Query: 118 TASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRT-----SEAQARK 172
T + P P+S T+ + R+ ++L R + +
Sbjct: 882 TQR--------LDLPDLPLSDILKGRTETLKPDPHLRKSPSLESLSRPPSLGFGDTRLLS 933
Query: 173 ALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNF 232
A W+ ++ + + A L R S + LL+WC+ KT GY ++D+ NF
Sbjct: 934 ASTRAWKPQSKLSVERKDPLAALAREYG------GSKRNALLKWCQKKTQGYANIDITNF 987
Query: 233 SSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMV 292
SSSWSDG+AFCAL+H++ P Y L+ ++++N LAF AE++ + +E+ +M+
Sbjct: 988 SSSWSDGLAFCALLHTYLPAHIPYQELNSQEKKRNLLLAFEAAESV-GIKPSLELSEMLY 1046
Query: 293 MGRKPDPMCVFTYVQSLYNH 312
R PD V YV +Y +
Sbjct: 1047 TDR-PDWQSVMQYVAQIYKY 1065
>gi|67782321 spectrin beta isoform a [Homo sapiens]
Length = 2328
Score = 90.9 bits (224), Expect = 1e-18
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 208 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 267
S K LL WC+ KT GY HV++ NF+SSW DG+AF AL+H PD D++ L + + N
Sbjct: 174 SAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHN 233
Query: 268 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 317
E AF +AE L++ ED V PD + TYV + Y++ + +
Sbjct: 234 LEHAFNVAERQLGIIPLLDPED--VFTENPDEKSIITYVVAFYHYFSKMK 281
>gi|67782319 spectrin beta isoform b [Homo sapiens]
Length = 2137
Score = 90.9 bits (224), Expect = 1e-18
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 208 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 267
S K LL WC+ KT GY HV++ NF+SSW DG+AF AL+H PD D++ L + + N
Sbjct: 174 SAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHN 233
Query: 268 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 317
E AF +AE L++ ED V PD + TYV + Y++ + +
Sbjct: 234 LEHAFNVAERQLGIIPLLDPED--VFTENPDEKSIITYVVAFYHYFSKMK 281
>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
Length = 3639
Score = 90.9 bits (224), Expect = 1e-18
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 199 QSFGVASAS-SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYN 257
+ FG ++A S K+ LL WC+ KT Y +V++ +FS SWSDG+ F AL+H+ PD DY
Sbjct: 133 EEFGASAALLSTKEALLVWCQRKTASYTNVNITDFSRSWSDGLGFNALIHAHRPDLLDYG 192
Query: 258 SLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRR 315
SL P + N AF +AE +L++ ED V +PD + TYV Y++ R
Sbjct: 193 SLRPDRPLHNLAFAFLVAEQELGIAQLLDPED--VAAAQPDERSIMTYVSLYYHYCSR 248
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 90.5 bits (223), Expect = 2e-18
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 14/138 (10%)
Query: 179 EQETAAGKGKGEARA----------RLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVD 228
E + A+G G G RA RL SQ+ +SS Q LLEWC+ T GY+ V
Sbjct: 1001 EAQVASGAGAGAPRASSPEKAEEDRRLPGSQAPPALVSSS--QSLLEWCQEVTTGYRGVR 1058
Query: 229 LQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVE 288
+ NF++SW +G+AFCA++H F+PD DY SL P ++N + AF L RL+E
Sbjct: 1059 ITNFTTSWRNGLAFCAILHRFYPDKIDYASLDPLNIKQNNKQAFDGFAAL-GVSRLLEPA 1117
Query: 289 DMMVMGRKPDPMCVFTYV 306
DM+++ PD + V TY+
Sbjct: 1118 DMVLLS-VPDKLIVMTYL 1134
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1
[Homo sapiens]
Length = 2564
Score = 89.0 bits (219), Expect = 5e-18
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 208 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 267
S K LL WC+ KT GY V++QNF++SW DG+AF AL+H PD D++ L+ + N
Sbjct: 181 SAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANYN 240
Query: 268 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 317
+ AF AE RL++ ED+ + PD + TYV S Y++ + +
Sbjct: 241 LQRAFRTAEQHLGLARLLDPEDVNM--EAPDEKSIITYVVSFYHYFSKMK 288
>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
Length = 887
Score = 88.2 bits (217), Expect = 9e-18
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 207 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 266
+S K+ LL WC+ KT Y++V++QNF SW DG+ FCAL+H P+ DY L
Sbjct: 144 TSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLT 203
Query: 267 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 311
N AF +AE + ++++ ED++ R PD + TYV S Y+
Sbjct: 204 NLNTAFDVAEKYLDIPKMLDAEDIVGTAR-PDEKAIMTYVSSFYH 247
>gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]
Length = 914
Score = 88.2 bits (217), Expect = 9e-18
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 207 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 266
+S K+ LL WC+ KT Y++V++QNF SW DG+ FCAL+H P+ DY L
Sbjct: 144 TSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLT 203
Query: 267 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 311
N AF +AE + ++++ ED++ R PD + TYV S Y+
Sbjct: 204 NLNTAFDVAEKYLDIPKMLDAEDIVGTAR-PDEKAIMTYVSSFYH 247
>gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]
Length = 892
Score = 88.2 bits (217), Expect = 9e-18
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 207 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 266
+S K+ LL WC+ KT Y++V++QNF SW DG+ FCAL+H P+ DY L
Sbjct: 144 TSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLT 203
Query: 267 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 311
N AF +AE + ++++ ED++ R PD + TYV S Y+
Sbjct: 204 NLNTAFDVAEKYLDIPKMLDAEDIVGTAR-PDEKAIMTYVSSFYH 247
>gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo
sapiens]
Length = 2155
Score = 88.2 bits (217), Expect = 9e-18
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 208 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 267
S K LL WC+ KT GY +V++ NF++SW DGMAF AL+H PD D++ L + N
Sbjct: 161 SAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYN 220
Query: 268 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 317
+ AF +AE +L++ ED+ V PD + TYV + Y++ + +
Sbjct: 221 LQNAFNLAEQHLGLTKLLDPEDISV--DHPDEKSIITYVVTYYHYFSKMK 268
>gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo
sapiens]
Length = 2364
Score = 88.2 bits (217), Expect = 9e-18
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 208 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 267
S K LL WC+ KT GY +V++ NF++SW DGMAF AL+H PD D++ L + N
Sbjct: 174 SAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYN 233
Query: 268 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 317
+ AF +AE +L++ ED+ V PD + TYV + Y++ + +
Sbjct: 234 LQNAFNLAEQHLGLTKLLDPEDISV--DHPDEKSIITYVVTYYHYFSKMK 281
>gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens]
Length = 2390
Score = 87.4 bits (215), Expect = 1e-17
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 208 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 267
S K LL WC+ KT GY +V++ NF++SW DG+AF A+VH PD D+ SL N
Sbjct: 177 SAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYN 236
Query: 268 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 317
+ AF +AE +L++ ED+ V +PD + TYV + Y++ + +
Sbjct: 237 LQNAFNLAEKELGLTKLLDPEDVNV--DQPDEKSIITYVATYYHYFSKMK 284
>gi|4557241 actinin, alpha 3 [Homo sapiens]
Length = 901
Score = 86.7 bits (213), Expect = 3e-17
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 207 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 266
+S K+ LL WC+ KT Y++V++QNF +SW DG+A CAL+H PD DY L
Sbjct: 158 TSAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIG 217
Query: 267 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 311
N AF +AE + ++++ ED +V KPD + TYV Y+
Sbjct: 218 NLNTAFEVAEKYLDIPKMLDAED-IVNTPKPDEKAIMTYVSCFYH 261
>gi|4501893 actinin, alpha 2 [Homo sapiens]
Length = 894
Score = 86.3 bits (212), Expect = 3e-17
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 207 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 266
+S K+ LL WC+ KT Y++V++QNF +SW DG+ CAL+H PD DY+ L+
Sbjct: 151 TSAKEGLLLWCQRKTAPYRNVNIQNFHTSWKDGLGLCALIHRHRPDLIDYSKLNKDDPIG 210
Query: 267 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 311
N LA +AE + ++++ ED +V KPD + TYV Y+
Sbjct: 211 NINLAMEIAEKHLDIPKMLDAED-IVNTPKPDERAIMTYVSCFYH 254
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 84.7 bits (208), Expect = 1e-16
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 213 LLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAF 272
LL WCR + GY+ V++++ SSS+ DG+AFCA++H PD D++SLS +N LAF
Sbjct: 8 LLAWCRRQCEGYRGVEIRDLSSSFRDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRLAF 67
Query: 273 TMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 312
+AE L++ DM+ M PD + + TYV YNH
Sbjct: 68 EVAEKELGIPALLDPNDMVSMS-VPDCLSIMTYVSQYYNH 106
Score = 29.6 bits (65), Expect = 3.7
Identities = 38/149 (25%), Positives = 57/149 (38%), Gaps = 30/149 (20%)
Query: 16 PGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPM 75
PG GP P A+ P RP ++P +P R G+ A P
Sbjct: 253 PGGGPSSSAPAGAEADGPKASPEARP-----QIPTKP---------RVPGKLQELASPPA 298
Query: 76 SAATLGGLNPSP---SEVITPWTPSPSEKNSSFTWS-VPSSGYGAVTASKHSNSP---PL 128
T P+P SE TP P+P ++S + V +G ++ + P P
Sbjct: 299 GRPT-----PAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHELPVPKPR 353
Query: 129 VTPPQSPVSP----QPPAITQVHRQGERR 153
TP S +P PP IT V + +++
Sbjct: 354 GTPKPSEGTPAPRKDPPWITLVQAEPKKK 382
>gi|12025678 actinin, alpha 4 [Homo sapiens]
Length = 911
Score = 82.8 bits (203), Expect = 4e-16
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 207 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 266
+S K+ LL WC+ KT Y++V++QNF SW DG+AF AL+H P+ +Y+ L
Sbjct: 163 TSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVT 222
Query: 267 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 311
N AF +AE + ++++ ED++ R PD + TYV S Y+
Sbjct: 223 NLNNAFEVAEKYLDIPKMLDAEDIVNTAR-PDEKAIMTYVSSFYH 266
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 79.7 bits (195), Expect = 3e-15
Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 213 LLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAF 272
L +WCR + GY+ V++ N ++S+ DG+AFCA++H PD ++++L +N +LAF
Sbjct: 7 LQQWCRQQCEGYRDVNICNMTTSFRDGLAFCAILHRHRPDLINFSALKKENIYENNKLAF 66
Query: 273 TMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 312
+AE L++ EDM+ + + PD + + TYV YN+
Sbjct: 67 RVAEEHLGIPALLDAEDMVAL-KVPDRLSILTYVSQYYNY 105
>gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 78.6 bits (192), Expect = 7e-15
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 211 QILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFEL 270
Q LL WC+ T Y+ V + NF++SW +G++FCA++H F PD DY SL+P ++N +
Sbjct: 412 QSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKK 471
Query: 271 AFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 312
A+ ++ RL+E DM+++ PD + V TY+ + H
Sbjct: 472 AYDGFASI-GISRLLEPSDMVLLA-IPDKLTVMTYLYQIRAH 511
>gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 78.6 bits (192), Expect = 7e-15
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 211 QILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFEL 270
Q LL WC+ T Y+ V + NF++SW +G++FCA++H F PD DY SL+P ++N +
Sbjct: 412 QSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKK 471
Query: 271 AFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 312
A+ ++ RL+E DM+++ PD + V TY+ + H
Sbjct: 472 AYDGFASI-GISRLLEPSDMVLLA-IPDKLTVMTYLYQIRAH 511
>gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]
Length = 1196
Score = 78.6 bits (192), Expect = 7e-15
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 211 QILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFEL 270
Q LL WC+ T Y+ V + NF++SW +G++FCA++H F PD DY SL+P ++N +
Sbjct: 412 QSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKK 471
Query: 271 AFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 312
A+ ++ RL+E DM+++ PD + V TY+ + H
Sbjct: 472 AYDGFASI-GISRLLEPSDMVLLA-IPDKLTVMTYLYQIRAH 511
>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
Length = 1231
Score = 78.6 bits (192), Expect = 7e-15
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 211 QILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFEL 270
Q LL WC+ T Y+ V + NF++SW +G++FCA++H F PD DY SL+P ++N +
Sbjct: 447 QSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKK 506
Query: 271 AFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 312
A+ ++ RL+E DM+++ PD + V TY+ + H
Sbjct: 507 AYDGFASI-GISRLLEPSDMVLLA-IPDKLTVMTYLYQIRAH 546
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,773,901
Number of Sequences: 37866
Number of extensions: 807069
Number of successful extensions: 7477
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 441
Number of HSP's that attempted gapping in prelim test: 6176
Number of HSP's gapped (non-prelim): 1523
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.